relaxMapOneStep: Relax a map one step in the optimiser

In Racmacs: Antigenic Cartography Macros

Relax a map one step in the optimiser

Description

Relax a map one step in the optimiser

Usage

relaxMapOneStep(
  map,
  optimization_number = 1,
  fixed_antigens = FALSE,
  fixed_sera = FALSE,
  options = list()
)

Arguments

map	The acmap data object
optimization_number	The map optimization number
fixed_antigens	Antigens to set fixed positions for when relaxing
fixed_sera	Sera to set fixed positions for when relaxing
options	List of named optimizer options, see RacOptimizer.options()

Value

Returns an updated map object

See Also

Other map optimization functions: RacOptimizer.options(), make.acmap(), moveTrappedPoints(), optimizeMap(), randomizeCoords(), relaxMap()

Racmacs documentation built on June 22, 2024, 11:33 a.m.