View source: R/rac_normaliseNames.R
standardizeStrainNames | R Documentation |
This is a utility function to help standardise antigen names into a more consistent format, also attempting to break apart different components of the name.
standardizeStrainNames(
names,
default_species = NA,
default_virus_type = "A",
default_virus_subtype = "HXNX"
)
names |
Strain names to be standardised |
default_species |
Are the strains isolated from a particular species? |
default_virus_type |
Default virus type to be used (if no type found in name) |
default_virus_subtype |
Default virus subtype to be used (if no subtype found in name) |
Returns a tibble of standardised names and extracted information
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