stressTable: Get a stress table from an acmap

In Racmacs: Antigenic Cartography Macros

Get a stress table from an acmap

Description

Get a stress table from an acmap

Usage

stressTable(map, optimization_number = 1)

Arguments

map	The acmap object
optimization_number	The optimization number for which to calculate stresses

Value

Returns a matrix of stresses, showing how much each antigen and sera measurement contributes to stress in the selected or specified optimization.

See Also

Other map diagnostic functions: agCohesion(), bootstrapBlobs(), bootstrapMap(), checkHemisphering(), dimensionTestMap(), logtiterTable(), map-table-distances, mapBootstrapCoords, mapDistances(), mapRelaxed(), mapResiduals(), pointStress, ptBootstrapBlob, ptBootstrapCoords(), ptLeverage, ptTriangulationBlob, recalculateStress(), tableColbases(), tableDistances(), triangulationBlobs(), unstableMaps

Other functions relating to map stress calculation: logtiterTable(), mapDistances(), mapResiduals(), pointStress, recalculateStress(), tableColbases(), tableDistances()

Racmacs documentation built on June 22, 2024, 11:33 a.m.