View source: R/sampleClustering.R
saveCounts | R Documentation |
Save a count result in a csv file.
saveCounts(filename.csv, counts, dir)
filename.csv |
character vector specifying the path and the name of the csv file. |
counts |
vector of counts. |
dir |
character vector specifying the directory where to save the csv file. |
saveCounts saves a count result in a csv file
csv file containing count result.
dat <- rbind(matrix(rnorm(100, mean = 0, sd = 0.3), ncol = 2),
matrix(rnorm(100, mean = 2, sd = 0.3), ncol = 2),
matrix(rnorm(100, mean = 4, sd = 0.3), ncol = 2))
tf1 <- tempfile()
write.table(dat, tf1, sep=",", dec=".")
x <- importSample(file.features=tf1)
res <- KmeansQuick(x$features$initial$x, K=3)
tf2 <- tempfile()
saveCounts(basename(tf2), table(res$cluster), dirname(tf2))
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