| Changes | Changes Made to Package RcppHMM |
| evaluation | Observed sequence evaluation given a model |
| forwardBackward | Forward-backward algortihm for hidden state decoding |
| generateObservations | Generate observations given a model |
| initGHMM | Random Initialization for a Hidden Markov Model with... |
| initHMM | Random Initialization for a Hidden Markov Model with... |
| initPHMM | Random Initialization for a Hidden Markov Model with... |
| learnEM | Expectation-Maximization algorithm to estimate the model... |
| loglikelihood | Evaluation of multiple observed sequences given a model |
| RcppHMM-package | Overview of Package RcppHMM |
| setNames | Set the names of the model |
| setParameters | Set the model parameters |
| verifyModel | Model parameter verification |
| viterbi | Viterbi algorithm for hidden state decoding |
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