Files in Rsampletrees
MCMC Sampling of Gene Genealogies Conditional on Genetic Data

MD5
NAMESPACE
DESCRIPTION
man/readOutput.Rd man/addTreeStats.Rd man/newArgs.Rd man/Rsampletrees-package.Rd man/merge.treeoutput.Rd man/restartRun.Rd man/readArgs.Rd man/plot.treeoutput.Rd man/example_g_pars.Rd man/pkg-internal.Rd man/print.treeoutput.Rd man/addTrees.Rd man/readTrees.Rd man/estimateHap.Rd man/print.pars.Rd man/checkArgs.Rd man/changeArgs.treeoutput.Rd man/launch.sampletrees.Rd
src/nodefunctions.cpp
src/p1p2.cpp
src/p6.cpp
src/p7.h
src/proposal.h
src/p6.h
src/rng.h
src/misc.cpp
src/UPGMA.h
src/p7.cpp
src/treeBuild.cpp
src/p4.h
src/models.h
src/UPGMA.cpp
src/p5.h
src/treesummaries.cpp
src/treeBuild.h
src/p1p2.h
src/proposal.cpp
src/p4.cpp
src/p3.cpp
src/treesummaries.h
src/sampletrees.cpp
src/Makevars.win
src/rng.cpp
src/rcpp_sampletrees.h
src/readFiles.cpp
src/registerDynamicSymbol.c
src/Makevars
src/readFiles.h
src/misc.h
src/rcpp_sampletrees.cpp
src/p3.h
src/models.cpp
src/nodefunctions.h
src/sampletrees.h
src/p5.cpp
R/pre_sampletrees.R R/post_sampletrees.R R/haplo_initialization.R
inst/extdata/weights-g.txt
inst/extdata/Example-g_accept.out
inst/extdata/EM-known.out
inst/extdata/sequences_Theta8_Rho8.txt
inst/extdata/example_h_2_pars
inst/extdata/EM-initial.out
inst/extdata/locations_Theta8_Rho8.txt
inst/extdata/Example-h-2_accept.out
inst/extdata/Example-h_lasttree.out
inst/extdata/geno_Theta8_Rho8.txt
inst/extdata/example_h_pars
inst/extdata/Example-g_firsttree.out
inst/extdata/weights-h.txt
inst/extdata/Example-h_firsttree.out
inst/extdata/Example-g_postprob.out
inst/extdata/Example-h-2_trees.out
inst/extdata/Example-g_sequences.out
inst/extdata/Example-g_lasttree.out
inst/extdata/Example-h-2_firsttree.out
inst/extdata/Example-h_accept.out
inst/extdata/Example-h-2_samples.out
inst/extdata/Example-g_samples.out
inst/extdata/Example-h_samples.out
inst/extdata/Example-g_trees.out
inst/extdata/Example-h_trees.out
inst/extdata/example_g_pars
inst/extdata/Example-g_haplolist.out
inst/extdata/EM-hapfreqs.out
inst/extdata/Example-h-2_lasttree.out
Rsampletrees documentation built on Aug. 30, 2017, 1:02 a.m.