print.treeoutput: Nice display of a treeoutput object

Description Usage Arguments Author(s) References See Also Examples

View source: R/post_sampletrees.R

Description

This function prints out information about a treeoutput object. The component runinfo is an object of class 'pars' and is printed using print.pars. The total number of samples and their first/last index is also printed.

Usage

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## S3 method for class 'treeoutput'
print(x, ...)

Arguments

x

An object of class 'treeoutput'

...

additional arguments to print; currently unused

Author(s)

Kelly Burkett

References

Burkett KM, McNeney B, Graham J. Sampletrees and Rsampletrees: sampling gene genealogies conditional on SNP genotype data. Bioinformatics. 32:1580-2, 2016

See Also

print.pars

Examples

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#\dontrun{
#system.file("Examples/example_g_pars",package="Rsampletrees")
filename=paste(path.package("Rsampletrees"),"/extdata/example_g_pars",sep="")

runpars=readArgs(filename, check=FALSE)
#paste(system.file(package="Rsampletrees"),runpars$RunName, sep="/")
runname=paste(path.package("Rsampletrees"),"extdata",runpars$RunName,sep="/")
runpars=changeArgs(runpars, RunName=runname)
results=readOutput(argobj=runpars)

print(results)

#}

Rsampletrees documentation built on March 3, 2020, 1:07 a.m.