Man pages for RxODE
Facilities for Simulating from ODE-Based Models

add.dosingAdd dosing to eventTable
add.samplingAdd sampling to eventTable
cholSEGeneralized Cholesky Matrix Decomposition
coef.RxODEReturn the RxODE coefficients
coxBoxCox Box transformation
cvPostSample a covariance Matrix from the Posteior Inverse Wishart...
dot-rxRmIniRemove INIs
dot-rxRmJacRemove Jacobian
dot-rxRmPrintRemove print statements
dot-rxRmSensRemove sensitivity equations
dot-rxRtoolsBaseWinReturn Rtools base
dot-rxSymPyJacobianCalculate the full Jacobian for a model
dot-rxWinRtoolsPathSetup Rtools path
eventTableCreate an event table object
findLhsFind the assignments in R expression
foceiFitCpp_Fit/Evaulate FOCEi
genShinyApp.templateGenerate an example (template) of a dosing regimen shiny app
is.rxSolveCheck to see if this is an rxSolve object.
plus-.rxSolveUpdate Solved object with '+'
print.rxCoefPrint the rxCoef object
print.rxCoefSolvePrint the rxCoefSolve object
print.rxDllPrint rxDll object
print.RxODEPrint information about the RxODE object.
reexportsObjects exported from other packages
rinvchisqScaled Inverse Chi Squared distribution
rxAddReturnAdd a return statment to a function.
rxAssignPtrAssign pointer based on model variables
rxBlockZerosCreates a logical matrix for block matrixes.
rxCReturn the C file associated with the RxODE object
rxCatUse cat when RxODE.verbose is TRUE
rxChainrxChain Chain or add item to solved system of equations
rxChain2Second command in chaining commands
rxCleanCleanup anonymous DLLs
rxCompileCompile a model if needed
rxConditionCurrent Condition for RxODE object
rxCoresGet the number of cores in a system
rxDeleteDelete the DLL for the model
rxDfdyJacobian and parameter derivatives
rxDllReturn the DLL associated with the RxODE object
rxDynLoadLoad RxODE object
rxDynUnloadUnload RxODE object
rxExpandIfElseExpand if/else clauses into mutiple different types of lines.
rxFoExpandEtaFirst Order Expansion of ETA
rxForgetClear memoise cache for RxODE
rxGetModelGet model properties without compiling it.
rxGetRxODEGet RxODE model from object
rxHtmlFormat rxSolve and related objects as html.
rxInitsInitial Values and State values for a RxODE object
rxInvInvert matrix using Rcpp Armadilo.
rxIsCheck the type of an object using Rcpp
rxIsCurrentChecks if the RxODE object was built with the current build
rxIsLoadedDetermine if the DLL associated with the RxODE object is...
rxLhsLeft handed Variables
rxLinCmtTransThis translates the parameters specified by the model in the...
rxMd5Return the md5 of an RxODE object or file
rxModels_Get the rxModels information
rxModelVarsAll model variables for a RxODE object
rxNormGet the normalized model
RxODECreate an ODE-based model specification
rxOptExprOptimize RxODE for computer evaluation
rxOptionsOptions for RxODE
rxParamsParameters specified by the model
rxParseErrPrepare Error function for inclusion in RxODE
rxParsePkParse PK function for inclusion in RxODE
rxParsePredPrepare Pred function for inclusion in RxODE
rxPermissivePermissive or Strict RxODE sytax options
rxPhysicalDrivesReturns a list of physical drives that have been or currently...
rxPrintPrint x using the message facility
rxProgressRxODE progress bar functions
rxReloadReload RxODE DLL
rxReqRequire namespace, otherwise throw error.
rxSetProdChoose the type of product to use in RxODE. These are used...
rxSetSumChoose the type of sums to use for RxODE.
rxSetupIniSetup the initial conditions.
rxSetupScaleSetup the initial conditions.
rxShinyUse Shiny to help develop an RxODE model
rxSimThetaOmegaSimulate Parameters from a Theta/Omega specification
rxSolveSolves a ODE equation
rxSolveFreeFree the C solving information.
rxSplitLinesSplit line into multiple lines at + or - breaks
rxSplitPlusQThis function splits a function based on + or - terms
rxStateState variables
rxSumProdModelRecast model in terms of sum/prod
rxSymInvCholGet Omega^-1 and derivatives
rxSymInvCholCreateCreates an object for calculating Omega/Omega^-1 and...
rxSymInvCholNReturn the dimension of the built-in derivatives/inverses
rxSymPyExecute sympy statement.
rxSymPyCleanRemove variables created by RxODE from the SymPy environment.
rxSymPyClearDelete variable if exists.
rxSymPyDfDyCalculate df/dy derivatives
rxSymPyExecExecute Python statement without getting the return value.
rxSymPyExistsDoes the varaible exist in the SymPy Python environment?
rxSymPyExpandReturn the expanded expression (via SymPy)
rxSymPyFixFix SymPy expressions to be R parsable expressions
rxSymPyFunctionsSetup SymPy functions
rxSymPyReservedReturn a list of reserved functions and variables from sympy
rxSymPySensitivityCalculate the sensitivity equations for a model
rxSymPySetupSetup a SymPy environment that sets up the specified RxODE...
rxSymPySetupIfSetup SymPy environment if needed
rxSymPySetupPredSetup Pred function based on RxODE object.
rxSymPyStartStart SymPy
rxSymPyVarsSetup SymPy variables
rxSymPyVersionReturn the version of SymPy that is running
rxSyncOptionsSync options with RxODE varaibles
rxSyPyAddVarsAdd undefined variables to SymPy
rxThetaEtaFormat theta and eta for parameter estimate values in RxODE
rxToSymPyConverts model specification to/from a SymPy language
rxTransTranslate the model to C code if needed
rxValidateValidate RxODE
rxVersionVersion and repository for this dparser package.
rxWinPythonSetupSetup Python and SymPy for windows
rxWinSetupSetup Windows components for RxODE
sqrtmReturn the square root of general square matrix A
summary.rxDllSummary of rxDll object
summary.RxODEPrint expanded information about the RxODE object.
yeoJohnsonYeo-Johnson Transformation
RxODE documentation built on Sept. 26, 2018, 1:03 a.m.