Files in RxODE

Facilities for Simulating from ODE-Based Models

configure

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

cleanup.win

configure.win

cleanup

R/RcppExports.R R/rxSymInv.R R/etTran.R R/str.R R/rxIndLin.R R/RxODE-win-setup.R R/print.R R/RxODE.R R/rxParams.R R/summary.R R/dsl.R R/format.R R/progress.R R/rxSyntaxFunctions.R R/et.R R/rxsolve.R R/rxReservedKeywords.R R/rxode-options.R R/rxFormat.R R/rxPrune.R R/RxODE_md5.R R/modlib.R R/plot.R R/rxShiny.R R/genShinyApp.template.R R/confint.R R/register-s3.R R/rxValidate.R R/rxLinCmt.R R/geom-amt.R R/version.R R/DollarNames.R R/geom-cens.R R/reexport.R R/symengine.R R/rxCbindStudyIndividual.R R/rxrandom.R R/rxOptExpr.R R/units.R R/utils.R R/rxJacobian.R

src/rxInv.cpp

src/seed.cpp

src/rxomp.h

src/genModelVars.c

src/prja.c

src/codegen.c

src/parseFunsDosing.h

src/strdup_printf.c

src/parseLinCmtTransCl.h

src/rxStack.cpp

src/utilcpp.cpp

src/parseFunsLinCmt.h

src/getOption.c

src/parseDfdy.h

src/call_dvode.c

src/common.h

src/tran.c

src/utilc.c

src/dsphiv.f

src/timsort.h

src/RcppExports.cpp

src/rxData.h

src/box.c

src/solsy.c

src/sbuf.c

src/getTime.h

src/ode.h

src/parseLinCmtTransK.h

src/checkmate.cpp

src/parseLinCmtAdjustPars.h

src/parseFunsRandom.h

src/lincmt.c

src/fnorm.c

src/tran.h

src/parseIdentifier.h

src/codegen2.h

src/parseVars.h

src/stoda.c

src/boost.cpp

src/parseIndLin.h

src/cbindThetaOmega.cpp

src/dop853.c

src/codegen.h

src/phim.cpp

src/par_solve.cpp

src/correction.c

src/dlsoda.f

src/strncmp.h

src/parseStatements.h

src/idamax.c

src/parseLinCmt.c

src/orderswitch.c

src/parseAssert.h

src/parseLogical.h

src/handle_evid.h

src/init.c

src/tran.g.d_parser.c

src/WinDrive.cpp

src/genModelVars.h

src/omegaChol.c

src/opkda2.f

src/parseDdt.h

src/handle_evid.c

src/lsoda.h

src/parseCmtProperties.h

src/forder.cpp

src/cfode_static.h

src/daxpy.c

src/parseLinCmtAB.h

src/lincmtB.cpp

src/parseSyntaxErrors.h

src/install.libs.R

src/parseFunsNa.h

src/cvPost.cpp

src/RxODE_types.h

src/checkmate_stub.c

src/corfailure.c

src/checkmate.h

src/rprintf.c

src/sbuf.h

src/parseLinCmt.h

src/qs.cpp

src/methodswitch.c

src/parseLinCmtTransAlpha.h

src/dgpadm.f

src/lsoda_internal.h

src/strncmp.c

src/ewset.c

src/vmnorm.c

src/rxthreefry.h

src/rxData.cpp

src/parseLinCmtV.h

src/print_node.h

src/intdy.c

src/Makevars.in

src/matexp.f

src/lincmtB1.h

src/expandGrid.cpp

src/cfode.c

src/rxOptRep.cpp

src/needSortDefines.h

src/dop853.h

src/seed.h

src/blas.h

src/common.c

src/et.cpp

src/lsoda.c

src/parseLinCmtCl.h

src/expm.cpp

src/dgefa.c

src/getOption.h

src/dgesl.c

src/cfode_static.c

src/print_node.c

src/matexp_HM98.c

src/fast_factor.cpp

src/etTran.cpp

src/parseFunsDiff.h

src/dscal.c

src/cbindThetaOmega.h

src/parseFuns.h

src/rxthreefry.cpp

src/ddot.c

src/scaleh.c

src/rxvandercorput.cpp

inst/tran.g

inst/workaround.R

inst/Changes.txt

inst/COPYRIGHTS

inst/CITATION

inst/THANKS

inst/WORDLIST

inst/include/RxODE_RcppExports.h

inst/include/RxODE_control.h

inst/include/RxODE_model_shared.h

inst/include/RxODE_types.h

inst/include/RxODE_as.h

inst/include/RxODE.h

inst/include/RxODE_model_shared.c

inst/doc/RxODE-syntax.Rmd

inst/doc/RxODE-syntax.html

inst/tutorials/RxODE01events/rxode01events.Rmd

inst/tutorials/RxODE01events/images/expandTutorial.png

inst/tutorials/RxODE00syntax/RxODE00syntax.Rmd

inst/tutorials/RxODE00syntax/images/expandTutorial.png

inst/tutorials/RxODE99-Intro2020/RxODE99-Intro2020.Rmd inst/tools/workaround.R

inst/tools/workaround.Rout

inst/po/en@quot/LC_MESSAGES/R-RxODE.mo

inst/po/en@quot/LC_MESSAGES/RxODE.mo

demo/00Index

demo/demo1.R

build/vignette.rds

build/buildRxODE.R build/depends.R build/refresh.R build/dual.R

build/partial.rdb

build/sensitivites.R tests/testthat.R tests/spelling.R tests/testthat/test-issue-56.R tests/testthat/test-issue-117.R tests/testthat/test-issue-243.R tests/testthat/test-fun.R tests/testthat/test-issue-67.R tests/testthat/test-435.R tests/testthat/test-gc.R tests/testthat/test-param-order.R tests/testthat/test-issue-8.R tests/testthat/test-issue-352.R tests/testthat/test-off.R tests/testthat/test-zzzzz.R tests/testthat/test-rxs.R tests/testthat/test-ignore-state.R tests/testthat/test-pred-fun-cimet.R tests/testthat/test-issue-433.R tests/testthat/test-lag.R tests/testthat/test-focei-sens.R tests/testthat/test-alag.R tests/testthat/test-issue-213.R tests/testthat/test-lhs-param.R tests/testthat/test-cov.R tests/testthat/test-newind.R tests/testthat/test-example-3-3.R tests/testthat/test-demo.R tests/testthat/test-random.R tests/testthat/test-issue-5.R tests/testthat/test-issue-398.R tests/testthat/test-issue-450.R tests/testthat/test-tad.R

tests/testthat/model_default.txt

tests/testthat/test-idFactor.R tests/testthat/test-data-frame.R tests/testthat/test-cholperm.R tests/testthat/test-ini.R tests/testthat/test-focei-setup.R tests/testthat/test-100-cmt.R tests/testthat/test-symmetric.R

tests/testthat/pheno_sd.rds

tests/testthat/test-issue-468.qs

tests/testthat/theoSd.rds

tests/testthat/test-issue-299.rds

tests/testthat/test-missing-evid.R tests/testthat/test-reset.R tests/testthat/test-lock.R tests/testthat/test-focei-setup-lin.R

tests/testthat/warfarin.rda

tests/testthat/test-keep.R tests/testthat/test-example-3-2.R tests/testthat/test-getindex.R tests/testthat/test-focei-wang2007.R tests/testthat/test-focei-long-lines.R tests/testthat/test-rhs.R tests/testthat/test-cmt-order.R tests/testthat/test-modelVars.R tests/testthat/test-dollar-names.R tests/testthat/test-example-6.R tests/testthat/test-issue-50.R tests/testthat/test-375.R tests/testthat/test-160.R tests/testthat/test-seq.R tests/testthat/test-deSolve-events.R tests/testthat/test-issue-431.R

tests/testthat/test-issue-398.qs

tests/testthat/test-bioavailibility.R tests/testthat/test-issue-430.R tests/testthat/test-rxIs.R tests/testthat/test-modelargs.R tests/testthat/test-named-id.R tests/testthat/test-cbind-study-individual.R tests/testthat/test-na.R tests/testthat/test-logical.R tests/testthat/test-occ.R tests/testthat/test-issue-7.R tests/testthat/test-example-3-5-1.R tests/testthat/test-derived.R

tests/testthat/etTrans1.rds

tests/testthat/test-issue-468.R tests/testthat/test-model-rate.R tests/testthat/test-dplyr.R

tests/testthat/433.qs

tests/testthat/test-load.R tests/testthat/test-rlkj.R tests/testthat/test-theta-eta.R tests/testthat/test-opt-expr.R tests/testthat/test-445.R tests/testthat/test-basic.R tests/testthat/test-evid2.R tests/testthat/test-progress.R tests/testthat/test-hmax.R tests/testthat/test-gammap.R tests/testthat/test-mtime.R

tests/testthat/si.qs

tests/testthat/test-parsing.R tests/testthat/test-phi.R tests/testthat/test-resample.R tests/testthat/test-data-table.R

tests/testthat/test-cbind-study-individual.qs

tests/testthat/test-449.R tests/testthat/test-issue-169.R tests/testthat/test-saem-setup.R tests/testthat/test-et.R tests/testthat/test-issue-178.R tests/testthat/test-issue-4.R tests/testthat/test-drop.R tests/testthat/test-multi.R tests/testthat/test-backward.R tests/testthat/test-npde-mac.R tests/testthat/test-bad-dose.R tests/testthat/test-example-3-1.R

tests/testthat/test-data-setup.rds

tests/testthat/test-omega-chol.R

tests/testthat/test-issue-430.qs

tests/testthat/test-logit.R tests/testthat/test-par-solve.R tests/testthat/test-pipeline.R tests/testthat/test-lincmt-solve.R tests/testthat/test-ind-lin.R tests/testthat/test-issue-349.R tests/testthat/test-evid3.R tests/testthat/test-mdv.R tests/testthat/test-dur-sens.R tests/testthat/test-rm-dll.R tests/testthat/test-expand-grid.R tests/testthat/test-rxRmvn.R tests/testthat/test-lhs-ifelse.R

tests/testthat/test-issue-393.qs

tests/testthat/test-etTrans-1.rds

tests/testthat/test-print.R tests/testthat/test-scale.R tests/testthat/test-transit.R

tests/testthat/etTrans-drop.rds

tests/testthat/test-issue-272.R tests/testthat/test-dsl.R tests/testthat/test-issue-54.R tests/testthat/test-zzzz-rxUse.R tests/testthat/test-ifelse.R tests/testthat/test-dfRep.R tests/testthat/test-etTrans.R tests/testthat/test-issue-163.R tests/testthat/test-cvpost.R tests/testthat/test-issue-233.R tests/testthat/test-steady-state.R tests/testthat/test-factorial.R tests/testthat/test-000sum.R tests/testthat/test-issue-410.R tests/testthat/test-issue-299.R tests/testthat/test-dfdy.R tests/testthat/test-issue-393.R

tests/testthat/test-issue-169.rds

vignettes/RxODE-syntax.Rmd

vignettes/events-classic.Rmdh

vignettes/eventTable-output-notebook-01.png

vignettes/reserved-keywords.csv

vignettes/logo.png

vignettes/df.Rmdh

vignettes/events-et.Rmdh

vignettes/eventTable-output-notebook-02.png

vignettes/syntax-functions.csv

data/rxSyntaxFunctions.rda

data/rxReservedKeywords.rda

po/R-RxODE.pot

po/RxODE.pot

man/rxRateDur.Rd man/stat_amt.Rd man/coef.RxODE.Rd man/rxgeom.Rd man/rLKJ1.Rd man/rxLock.Rd man/uppergamma.Rd man/rxodeTest.Rd man/rxDelete.Rd man/rxnormV.Rd man/rxRandNV.Rd man/rxSplitPlusQ.Rd man/rxSEinner.Rd man/etExpand.Rd man/rxSymInvCholCreate.Rd man/rxPp.Rd man/etTrans.Rd man/rxSymInvCholN.Rd man/lowergamma.Rd man/rxShiny.Rd man/rxchisq.Rd man/rxPhysicalDrives.Rd man/rxParams.Rd man/rxgamma.Rd man/rxAllowUnload.Rd man/reexports.Rd man/rxcauchy.Rd man/rxPrune.Rd man/plus-.rxSolve.Rd man/gammap.Rd man/rxReload.Rd man/rxState.Rd man/rxSymInvChol.Rd man/rxGetModel.Rd man/et.Rd man/rxDll.Rd man/rxSetSeed.Rd man/print.rxDll.Rd man/summary.rxDll.Rd man/rxInv.Rd man/rxweibull.Rd man/rxGetLin.Rd man/dot-rxWithOptions.Rd man/gammapInv.Rd man/logit.Rd man/rxLhs.Rd man/rxValidate.Rd man/rxS.Rd man/summary.RxODE.Rd man/rxunif.Rd man/rxTrans.Rd man/rxRmvn.Rd man/rxEvid.Rd man/rxDfdy.Rd man/rxHtml.Rd man/rxSetSilentErr.Rd man/rxIsCurrent.Rd man/rxCondition.Rd man/rxParsePred.Rd man/rxSolveFree.Rd man/rxSetIni0.Rd man/rxDynLoad.Rd man/genShinyApp.template.Rd man/rxSetProgressBar.Rd man/rxCreateCache.Rd man/rxf.Rd man/rxForget.Rd man/gammaq.Rd man/rxModelVars.Rd man/rxClean.Rd man/rxParsePk.Rd man/rxSetProd.Rd man/rxt.Rd man/rxC.Rd man/rxProgress.Rd man/dot-rxWithWd.Rd man/dot-s3register.Rd man/rxD.Rd man/gammaqInv.Rd man/rxGetRxODE.Rd man/rxModels_.Rd man/rxMd5.Rd man/rxTempDir.Rd man/rxbeta.Rd man/rxWinSetup.Rd man/findLhs.Rd man/rxSuppressMsg.Rd man/rxIndLinStrategy.Rd man/forderForceBase.Rd man/dot-clearPipe.Rd man/rxDynUnload.Rd man/rxChain.Rd man/as.et.Rd man/rxFun.Rd man/rxSetupScale.Rd man/dot-rxGenFoce.Rd man/add.dosing.Rd man/getRxThreads.Rd man/rxAssignPtr.Rd man/rxToSE.Rd man/rxPkg.Rd man/rxSupportedFuns.Rd man/rxVersion.Rd man/rxBlockZeros.Rd man/is.rxEt.Rd man/rxGenSaem.Rd man/guide_none.Rd man/rxexp.Rd man/probit.Rd man/rxIndLinState.Rd man/rxInits.Rd man/rxUnloadAll.Rd man/stat_cens.Rd man/RxODE.Rd man/add.sampling.Rd man/rxParseErr.Rd man/rxCompile.Rd man/rxExpandIfElse.Rd man/dot-setWarnIdSort.Rd man/rxSetupIni.Rd man/invWR1d.Rd man/rxbinom.Rd man/etRbind.Rd man/rxStack.Rd man/rxReq.Rd man/rxpois.Rd man/phi.Rd man/etRep.Rd man/cvPost.Rd man/eventTable.Rd man/rxCbindStudyIndividual.Rd man/rxOptExpr.Rd man/rxSyncOptions.Rd man/rinvchisq.Rd man/print.RxODE.Rd man/rxChain2.Rd man/rxIs.Rd man/etSeq.Rd man/rxSyntaxFunctions.Rd man/rxIsLoaded.Rd man/rxSimThetaOmega.Rd man/print.rxCoef.Rd man/rxSumProdModel.Rd man/dot-rxWithSink.Rd man/rxNorm.Rd man/is.rxSolve.Rd man/rxReservedKeywords.Rd man/rxTheme.Rd man/rxCat.Rd man/rxSetSum.Rd man/rxSolve.Rd man/rxExpandGrid.Rd man/gammapDer.Rd man/rxDerived.Rd man/rxUse.Rd man/rmdhunks/rxode-cmt-preassign-1.Rmd man/rmdhunks/RxODE-intro-chunk.Rmd man/rmdhunks/rxode-cmt-preassign-2.Rmd man/rmdhunks/rxode-cmt-assign.Rmd man/rmdhunks/RxODE-syntax-hunk.Rmd

man/figures/README-intro-central-1.png

man/figures/README-unnamed-chunk-15-1.png

man/figures/README-intro-effect-1.png

man/figures/README-unnamed-chunk-14-1.png

RxODE documentation built on March 23, 2022, 9:06 a.m.