Files in SATS
Signature Analyzer for Targeted Sequencing (SATS)
MD5
NAMESPACE
DESCRIPTION
R/source.R
R/V_matrix_Generation.R
R/mappingSignature.R
R/input_conversion.R
R/constants.R
R/L_matrix_Generation.R
R/source_check.R
src/SATS_init.c
src/source.c
inst/extdata/SimData_W_TMB.rda
inst/extdata/refitting_examples/DBS_MAF_two_samples.txt
inst/extdata/refitting_examples/SBS_MAF_two_samples.txt
inst/extdata/refitting_examples/SBS_two_variants.vcf
inst/extdata/refitting_examples/SATS_example_panel.bed
inst/extdata/test_objects/test_GeneratePanelSize.rda
inst/extdata/test_objects/test_CalculateSignatureBurdens.rda
inst/extdata/test_objects/test_EstimateSigActivity.rda
tests/testthat.R
tests/testthat/test-GeneratePanelSize.R
tests/testthat/test-ValidateSATSInputs.R
tests/testthat/test-CalculateSignatureBurdens.R
tests/testthat/test-input-conversion.R
tests/testthat/test-EstimateSigActivity.R
tests/testthat/test-GenerateVMatrix.R
data/SimData.rda
data/RefTMB.rda
man/CalculateSignatureBurdens.Rd
man/GenerateVMatrix.Rd
man/SATS-package.Rd
man/ReadVCFAsMutationRecord.Rd
man/ValidateSATSInputs.Rd
man/ReadBEDAsPanelInfo.Rd
man/MappingSignature.Rd
man/SimData.Rd
man/GenerateLMatrix.Rd
man/RefTMB.Rd
man/GeneratePanelSize.Rd
man/EstimateSigActivity.Rd
