predict-SDMmodel-method: Predict

Description Usage Arguments Details Value Author(s) References Examples

Description

Predict the output for a new dataset given a trained SDMmodel model.

Usage

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## S4 method for signature 'SDMmodel'
predict(
  object,
  data,
  type = NULL,
  clamp = TRUE,
  filename = "",
  format = "GTiff",
  extent = NULL,
  progress = "",
  ...
)

Arguments

object

SDMmodel object.

data

data.frame, SWD or stack with the data for the prediction.

type

character. Output type, see details, used only for Maxent and Maxnet methods, default is NULL.

clamp

logical for clumping during prediction, used only for Maxent and Maxnet methods, default is TRUE.

filename

character. Output file name for the prediction map, used only when data is a stack object. If provided the output is saved in a file.

format

character. The output format, see writeRaster for all the options, default is "GTiff".

extent

extent object, if provided it restricts the prediction to the given extent, default is NULL.

progress

character to display a progress bar: "text", "window" or "" (default) for no progress bar.

...

Additional arguments to pass to the writeRaster function.

Details

Value

A vector with the prediction or a raster object if data is a raster stack.

Author(s)

Sergio Vignali

References

Wilson P.D., (2009). Guidelines for computing MaxEnt model output values from a lambdas file.

Examples

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# Acquire environmental variables
files <- list.files(path = file.path(system.file(package = "dismo"), "ex"),
                    pattern = "grd", full.names = TRUE)
predictors <- raster::stack(files)

# Prepare presence and background locations
p_coords <- virtualSp$presence
bg_coords <- virtualSp$background

# Create SWD object
data <- prepareSWD(species = "Virtual species", p = p_coords, a = bg_coords,
                   env = predictors, categorical = "biome")

# Split presence locations in training (80%) and testing (20%) datasets
datasets <- trainValTest(data, test = 0.2, only_presence = TRUE)
train <- datasets[[1]]
test <- datasets[[2]]

# Train a model
model <- train(method = "Maxnet", data = train, fc = "l")

# Make cloglog prediction for the test dataset
predict(model, data = test, type = "cloglog")

# Make logistic prediction for the all study area
predict(model, data = predictors, type = "logistic")

## Not run: 
# Make logistic prediction for the all study area and save it in a file
# The function saves the file in your working directory
predict(model, data = predictors, type = "logistic", filename = "my_map")

## End(Not run)

Example output

   _____  ____   __  ___ __
  / ___/ / __ \ /  |/  // /_ __  __ ____   ___
  \__ \ / / / // /|_/ // __// / / // __ \ / _ \
 ___/ // /_/ // /  / // /_ / /_/ // / / //  __/
/____//_____//_/  /_/ \__/ \__,_//_/ /_/ \___/  version 1.1.3

To cite this package in publications type: citation("SDMtune").
Extracting predictor information for presence locations...
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Extracting predictor information for absence/background locations...
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   [1] 0.596400811 0.825653630 0.721539774 0.814110523 0.508660810 0.486991123
   [7] 0.498987286 0.225127540 0.812442881 0.767229625 0.634638484 0.239042814
  [13] 0.587820574 0.682162991 0.468003044 0.639113829 0.564213760 0.802302363
  [19] 0.603118527 0.828618027 0.904837495 0.897907326 0.897674586 0.919920655
  [25] 0.833536760 0.588474125 0.762818235 0.237069534 0.766583857 0.594520742
  [31] 0.486006143 0.459778592 0.508183204 0.925493194 0.568457722 0.537813628
  [37] 0.530108801 0.536469276 0.506631947 0.508657837 0.103698797 0.857273306
  [43] 0.567031014 0.349819679 0.534703227 0.879299432 0.900997825 0.905183142
  [49] 0.984996504 0.597133915 0.932098983 0.363791065 0.600585710 0.433443314
  [55] 0.365247217 0.699099946 0.880127707 0.618333988 0.600381659 0.553281916
  [61] 0.922180261 0.519311351 0.737466839 0.622508149 0.678703458 0.200397388
  [67] 0.823597630 0.910286195 0.231884024 0.190611285 0.639339534 0.567166651
  [73] 0.989003577 0.567014763 0.864038980 0.796814860 0.945523951 0.824707358
  [79] 0.591040719 0.606140996 0.173517563 0.526922920 0.456849155 0.048799100
  [85] 0.517642380 0.756409903 0.174831983 0.061103060 0.027699613 0.263336012
  [91] 0.143850577 0.063783371 0.473689701 0.107704397 0.208836199 0.034818136
  [97] 0.151106067 0.092413628 0.047741175 0.271951041 0.240020979 0.847658825
 [103] 0.974121485 0.119654253 0.029108935 0.034919110 0.025635685 0.778811463
 [109] 0.042098962 0.553790968 0.021793977 0.626438895 0.346689722 0.020725738
 [115] 0.073713865 0.721539774 0.055356657 0.080988956 0.024039241 0.014917761
 [121] 0.140527502 0.823295548 0.567014763 0.027334386 0.706810860 0.597043221
 [127] 0.117636488 0.400379779 0.020646243 0.170104155 0.083285120 0.162041150
 [133] 0.201564357 0.029116847 0.586468611 0.037376452 0.669954422 0.018136435
 [139] 0.031948718 0.087534454 0.115687439 0.018566855 0.059513771 0.046578220
 [145] 0.294314157 0.909600224 0.798429001 0.142673479 0.250711090 0.869406075
 [151] 0.030684537 0.038204752 0.023536482 0.018493880 0.020591323 0.388773413
 [157] 0.213679945 0.389290061 0.527246905 0.018374734 0.084946545 0.134829153
 [163] 0.052457432 0.070398218 0.135372979 0.452604808 0.023716264 0.030342308
 [169] 0.129894415 0.067222851 0.355377783 0.018249883 0.016619140 0.807034099
 [175] 0.025724776 0.132373843 0.025673071 0.256707168 0.062643485 0.058764123
 [181] 0.634725794 0.016505181 0.151144178 0.567166651 0.055032404 0.355572912
 [187] 0.466582909 0.976659242 0.254949020 0.615444902 0.022579319 0.018183121
 [193] 0.527416950 0.041852731 0.049898953 0.032993294 0.578956015 0.060358234
 [199] 0.976424984 0.079089850 0.082798456 0.681579983 0.450254838 0.094299703
 [205] 0.648169644 0.645058157 0.439470821 0.702157579 0.025323884 0.016372308
 [211] 0.025487732 0.031001884 0.021835159 0.032537154 0.034114839 0.612015122
 [217] 0.053686721 0.081012497 0.018623129 0.053212134 0.596979251 0.718567358
 [223] 0.566110026 0.024756729 0.071150800 0.029479256 0.398762824 0.022347381
 [229] 0.354497111 0.101614695 0.017015626 0.068917579 0.585534502 0.065088050
 [235] 0.041262372 0.017723034 0.034016679 0.095364912 0.029669074 0.130608734
 [241] 0.026867407 0.783873286 0.611253259 0.017091837 0.860978893 0.035917073
 [247] 0.103459627 0.633500639 0.039323394 0.080288561 0.161567292 0.030842119
 [253] 0.062528654 0.702587038 0.376974510 0.349183927 0.068811426 0.018762989
 [259] 0.027307006 0.822540745 0.017369481 0.024816505 0.036459644 0.485771524
 [265] 0.027796864 0.528053275 0.282519888 0.115111712 0.024522254 0.428353613
 [271] 0.588523444 0.016604943 0.218652768 0.017357409 0.016101054 0.843224193
 [277] 0.915038403 0.068940866 0.843374310 0.024033328 0.054091272 0.051570830
 [283] 0.028361297 0.144251223 0.546863898 0.074887167 0.062235354 0.041089577
 [289] 0.025520592 0.667167756 0.015478491 0.021152846 0.092424002 0.349819394
 [295] 0.099623416 0.682162991 0.167197660 0.036855495 0.046129355 0.331043504
 [301] 0.018888862 0.084980681 0.136162371 0.112959483 0.413836968 0.048930665
 [307] 0.096754509 0.136112493 0.015019906 0.618788369 0.617378479 0.687878130
 [313] 0.643709785 0.081900930 0.067069435 0.151717722 0.831997481 0.137217186
 [319] 0.522758733 0.035444581 0.292446143 0.427426982 0.675107523 0.461855129
 [325] 0.013695085 0.858313861 0.746113951 0.019719828 0.294128668 0.070497755
 [331] 0.029024049 0.028438336 0.114772332 0.070432768 0.074482616 0.002533482
 [337] 0.083271362 0.051735530 0.481273681 0.375857513 0.018778277 0.136079421
 [343] 0.299700601 0.983868718 0.320465774 0.940072187 0.020603468 0.121370907
 [349] 0.052764585 0.060363566 0.020566014 0.501611950 0.615021465 0.117561055
 [355] 0.501432371 0.812858533 0.043567059 0.261190924 0.021747319 0.111191154
 [361] 0.016701563 0.020286553 0.341635293 0.073252461 0.028012633 0.311534016
 [367] 0.025558811 0.014090888 0.043168538 0.118561802 0.767771970 0.168871966
 [373] 0.612743635 0.299754213 0.368122023 0.094749021 0.887318974 0.028574239
 [379] 0.020832720 0.029584041 0.179318547 0.922180261 0.038357585 0.438002266
 [385] 0.081223778 0.123646842 0.132946947 0.358686051 0.034330994 0.015941324
 [391] 0.120350684 0.469772875 0.083267405 0.397682831 0.180816265 0.051214948
 [397] 0.418527291 0.885450972 0.918274501 0.123166984 0.830527448 0.085734192
 [403] 0.081409763 0.422015567 0.411142462 0.104837820 0.727242583 0.090635184
 [409] 0.081702235 0.085258663 0.873128683 0.769683916 0.491922018 0.632725846
 [415] 0.265955198 0.621294572 0.445676457 0.711696758 0.054278175 0.041368905
 [421] 0.789423332 0.221238438 0.247518245 0.151212666 0.029073108 0.653836527
 [427] 0.624074523 0.054461940 0.029283799 0.818178763 0.314305532 0.029077301
 [433] 0.022875687 0.036355033 0.020349251 0.844379098 0.025067429 0.016386121
 [439] 0.600104663 0.021321497 0.025522855 0.014397170 0.889562327 0.022070504
 [445] 0.423282213 0.710562949 0.104330608 0.425506130 0.554847171 0.370329260
 [451] 0.230973599 0.041339276 0.833625391 0.678192824 0.737323192 0.140228050
 [457] 0.778896288 0.081370532 0.082744172 0.138045178 0.984520987 0.118581178
 [463] 0.026746928 0.940818831 0.013881288 0.371796313 0.175860594 0.915466128
 [469] 0.923719421 0.692053332 0.079537296 0.857620250 0.020140661 0.015751879
 [475] 0.025170454 0.063374549 0.070931300 0.811453191 0.500921938 0.354759417
 [481] 0.644943850 0.021308303 0.024501550 0.025226411 0.022885417 0.029342935
 [487] 0.025708323 0.085239623 0.180922704 0.197541680 0.353224369 0.069741172
 [493] 0.930993757 0.013250788 0.024185767 0.035913454 0.026896130 0.532544730
 [499] 0.029244400 0.756323811 0.423518907 0.382164162 0.093876022 0.051697258
 [505] 0.028076204 0.153760242 0.065150419 0.126327427 0.875414226 0.017642260
 [511] 0.020630544 0.374021070 0.022421348 0.031953303 0.034501744 0.849607115
 [517] 0.730991469 0.129504513 0.513663298 0.156054594 0.061115227 0.845856029
 [523] 0.142442456 0.628765267 0.078069582 0.265795766 0.476864416 0.387965666
 [529] 0.638896856 0.172453082 0.018740533 0.014546722 0.097377808 0.872308938
 [535] 0.032342426 0.619809017 0.005236389 0.458340369 0.436941619 0.099927117
 [541] 0.065177429 0.445908299 0.028809559 0.245043096 0.017927627 0.462435362
 [547] 0.016431760 0.192478273 0.265968209 0.030861297 0.365121122 0.060199591
 [553] 0.095412817 0.591600711 0.024544793 0.130820401 0.382264947 0.037028797
 [559] 0.024382130 0.117860221 0.016475086 0.100172401 0.866926091 0.372571853
 [565] 0.016245590 0.027021783 0.105464546 0.026779224 0.035362490 0.478624288
 [571] 0.064778218 0.104064976 0.656401573 0.887454107 0.079464776 0.081365216
 [577] 0.082526273 0.460418267 0.030075736 0.097151405 0.693158503 0.752023297
 [583] 0.042209080 0.632569069 0.732034611 0.342474480 0.068768840 0.457927185
 [589] 0.422999542 0.564213760 0.020029453 0.299634936 0.040318607 0.024214636
 [595] 0.018408219 0.023785594 0.024287697 0.065213372 0.063586916 0.868575791
 [601] 0.356094454 0.457594229 0.303298286 0.859672800 0.215057026 0.655187818
 [607] 0.927601443 0.016837400 0.337993315 0.052408643 0.084755654 0.926244442
 [613] 0.110390795 0.194245952 0.019437123 0.019485605 0.066653901 0.355054632
 [619] 0.030959389 0.754756124 0.023621682 0.799820812 0.520404445 0.204755352
 [625] 0.936843072 0.497406879 0.205600071 0.519647945 0.070931666 0.695412655
 [631] 0.191405644 0.179701422 0.458452165 0.024457545 0.369290685 0.120303161
 [637] 0.146388695 0.079561198 0.945783480 0.535930221 0.445057312 0.026077605
 [643] 0.019513289 0.036585750 0.624345085 0.154905118 0.025448433 0.097930912
 [649] 0.577818172 0.154282086 0.172020287 0.144691743 0.030334546 0.082466352
 [655] 0.636424353 0.003324755 0.147778043 0.100357154 0.762636195 0.023366943
 [661] 0.092697252 0.069848895 0.045319124 0.019093410 0.032625191 0.581566355
 [667] 0.898395342 0.117742098 0.023065741 0.250352116 0.150737627 0.024665482
 [673] 0.618726747 0.027439168 0.909321823 0.017841344 0.033474113 0.158398191
 [679] 0.020681751 0.085058851 0.205211914 0.065429742 0.087907253 0.883374351
 [685] 0.266735757 0.012841941 0.965202043 0.028394245 0.883718155 0.209984119
 [691] 0.530108801 0.051928636 0.624717406 0.446189037 0.975160751 0.014089854
 [697] 0.045321608 0.019296671 0.111316725 0.437592738 0.019722926 0.014784181
 [703] 0.153559811 0.910286195 0.121029744 0.021049108 0.056590945 0.146298737
 [709] 0.013726336 0.404097784 0.870663999 0.015299959 0.149726818 0.064141389
 [715] 0.016926677 0.093022232 0.098192754 0.028284756 0.025932295 0.105020581
 [721] 0.053188521 0.069896935 0.639113829 0.100133269 0.022284675 0.021652074
 [727] 0.071090404 0.367675510 0.156599485 0.100197189 0.153818837 0.112050528
 [733] 0.513398179 0.069692881 0.620408572 0.083334285 0.623830547 0.414482271
 [739] 0.071890336 0.042434463 0.031727060 0.702140330 0.303716224 0.016127633
 [745] 0.732665834 0.664290121 0.070367630 0.881359745 0.013972450 0.037980466
 [751] 0.541237637 0.622425214 0.029183854 0.071863255 0.041792084 0.662677255
 [757] 0.017160352 0.057071862 0.020905590 0.028120457 0.046845040 0.081273965
 [763] 0.263595653 0.143773645 0.137115944 0.023145216 0.018249404 0.463363370
 [769] 0.020618891 0.022825035 0.630083310 0.017653384 0.032175827 0.062748418
 [775] 0.116505545 0.499071410 0.075263698 0.706389194 0.398006312 0.017161493
 [781] 0.085059858 0.470323480 0.015878500 0.680976745 0.438519392 0.265733358
 [787] 0.072563851 0.551789037 0.068134220 0.014948630 0.487035066 0.523001051
 [793] 0.951896141 0.140756138 0.028974437 0.033429837 0.588522428 0.688561498
 [799] 0.077851986 0.062201372 0.232290166 0.512870812 0.022366350 0.695288499
 [805] 0.021447957 0.056193829 0.864068546 0.744933722 0.021859345 0.029483548
 [811] 0.025149756 0.549427522 0.013124698 0.875380851 0.065207666 0.096603844
 [817] 0.640373649 0.041662123 0.023257822 0.803273692 0.029160227 0.056184020
 [823] 0.088475164 0.129667290 0.016512783 0.872611246 0.021439491 0.496140692
 [829] 0.031325195 0.022078273 0.025804531 0.390974383 0.191700673 0.339997319
 [835] 0.016437355 0.071447117 0.057197209 0.026537008 0.026739539 0.672761100
 [841] 0.067730226 0.275136439 0.374244499 0.405872643 0.465986859 0.127198898
 [847] 0.130380747 0.124976424 0.123186231 0.932839154 0.637847214 0.064118913
 [853] 0.151609144 0.028927647 0.094629512 0.450264432 0.066525283 0.134070312
 [859] 0.220483589 0.411329917 0.081456428 0.657452408 0.578621321 0.016266130
 [865] 0.016174623 0.151320592 0.104510225 0.304375161 0.045415542 0.080463841
 [871] 0.058782428 0.136936673 0.456424345 0.504813349 0.032128001 0.809714845
 [877] 0.462705677 0.352086677 0.038087635 0.266917437 0.553336939 0.133757312
 [883] 0.769045610 0.135456811 0.173154748 0.876625408 0.023216688 0.114792598
 [889] 0.021432625 0.020407992 0.705135966 0.095962073 0.578208997 0.028431610
 [895] 0.094911708 0.042525939 0.647873828 0.469025670 0.096072912 0.017720772
 [901] 0.033002249 0.017839819 0.830545997 0.559855794 0.101318175 0.357395178
 [907] 0.084995310 0.028364833 0.580720116 0.027768047 0.016859889 0.065983807
 [913] 0.312235301 0.032832718 0.344851278 0.605551221 0.546887088 0.022645812
 [919] 0.238693057 0.026005256 0.030431199 0.694168252 0.064276287 0.516778926
 [925] 0.856017568 0.088904423 0.941508572 0.020718817 0.163330462 0.169369838
 [931] 0.021528311 0.488001674 0.030326129 0.617139132 0.753499511 0.018773489
 [937] 0.446908316 0.027387641 0.872821915 0.029879321 0.024811289 0.046620624
 [943] 0.553169340 0.114030509 0.027712065 0.030142719 0.262491953 0.696278379
 [949] 0.592756806 0.022904534 0.046984765 0.504761973 0.602549589 0.049352317
 [955] 0.649811176 0.475116313 0.235194082 0.222077592 0.298686246 0.063380563
 [961] 0.076246531 0.091615571 0.017258925 0.051600673 0.593867196 0.035934595
 [967] 0.020015282 0.021641426 0.022367041 0.030682620 0.020862047 0.234720794
 [973] 0.016825618 0.599476132 0.024575737 0.013799583 0.067444459 0.021192871
 [979] 0.307270519 0.086285309 0.861319942 0.017939799 0.020043766 0.147965513
 [985] 0.716665153 0.836853477 0.034799588 0.028778809 0.074783450 0.493103117
 [991] 0.302819967 0.152953239 0.217090595 0.565061664 0.030780900 0.837654410
 [997] 0.629696317 0.163019389 0.013513845 0.085534451 0.611928693 0.586021746
[1003] 0.365529924 0.131855078 0.374045109 0.066753585 0.165784143 0.103582320
[1009] 0.103410806 0.028865484 0.291076195 0.576717252 0.155399244 0.020462992
[1015] 0.021699564 0.875433284 0.023827054 0.554446427 0.523139876 0.826579886
[1021] 0.032272899 0.444949043 0.804813666 0.131773231 0.237556951 0.089176476
[1027] 0.263987157 0.012205155 0.309372604 0.020740703 0.134353715 0.019804958
[1033] 0.057917542 0.221138088 0.640356874 0.191554803 0.448351895 0.065012424
[1039] 0.021153587 0.080865953 0.021998214 0.024237491 0.051207763 0.021207724
[1045] 0.404691490 0.255317643 0.838884606 0.083612036 0.254672566 0.077776190
[1051] 0.864538309 0.027377460 0.095070472 0.022465691 0.179063250 0.625353623
[1057] 0.426474772 0.074700448 0.763113701 0.038291891 0.023845309 0.042514648
[1063] 0.263162487 0.028803560 0.107212047 0.140141920 0.587341220 0.170011379
[1069] 0.019588581 0.564257056 0.021178805 0.021342136 0.452307217 0.186845772
[1075] 0.016471772 0.029999199 0.062970838 0.683691894 0.454901673 0.018390892
[1081] 0.079770196 0.117893896 0.013877090 0.474932601 0.158118595 0.041589982
[1087] 0.016034537 0.693243397 0.074893998 0.068318706 0.180988622 0.726116685
[1093] 0.020350446 0.176087665 0.069145541 0.661776056 0.032508634 0.844376973
[1099] 0.890288368 0.573370166 0.435090879 0.029154485 0.428663357 0.016595910
[1105] 0.151742963 0.030119000 0.351474935 0.624222567 0.038953667 0.084123451
[1111] 0.079099931 0.740114667 0.140487605 0.357010244 0.251035133 0.012591801
[1117] 0.021136174 0.476241598 0.218147981 0.032578032 0.044548864 0.061224925
[1123] 0.527276502 0.584143179 0.153852325 0.734168325 0.026160586 0.338821304
[1129] 0.023401791 0.456521021 0.015942165 0.045479293 0.168038771 0.030443549
[1135] 0.039027907 0.024529024 0.075868457 0.139300310 0.116122563 0.865834407
[1141] 0.034419654 0.027853678 0.819105546 0.823185519 0.673468840 0.016240206
[1147] 0.109397234 0.017751482 0.126565631 0.918644663 0.191792141 0.424397331
[1153] 0.085353757 0.044396791 0.021469548 0.023193875 0.088575496 0.064024133
[1159] 0.082198148 0.039237052 0.016850527 0.084224076 0.034362006 0.020019757
[1165] 0.600192304 0.070435851 0.033125911 0.070164311 0.094999092 0.135501756
[1171] 0.016498605 0.023503365 0.100249797 0.242841377 0.064569989 0.598874184
[1177] 0.084209588 0.088965635 0.021779768 0.175607022 0.162913808 0.027509182
[1183] 0.022004537 0.403093148 0.551797169 0.103698797 0.242977214 0.021196574
[1189] 0.017830489 0.058219521 0.015411819 0.021264587 0.635106491 0.066816077
[1195] 0.133940983 0.014930861 0.104886680 0.014574020 0.362742004 0.079022624
[1201] 0.765079735 0.591530296 0.088294754 0.048055408 0.088012274 0.463429401
[1207] 0.022432222 0.147818606 0.232501681 0.026292286 0.054421388 0.020262308
[1213] 0.015810892 0.072933977 0.943541224 0.051389936 0.015354118 0.271986828
[1219] 0.132017569 0.616785424 0.018697562 0.704866770 0.689234763 0.029237327
[1225] 0.070028228 0.440887018 0.284682485 0.582025121 0.113478153 0.017655532
[1231] 0.048506385 0.397365966 0.850027242 0.590685625 0.580508019 0.091166007
[1237] 0.031561931 0.031161434 0.021772579 0.129053285 0.032384582 0.044466752
[1243] 0.275724752 0.020770301 0.408786011 0.143892770 0.084524226 0.097932075
[1249] 0.220593198 0.013951646 0.055572203 0.240042916 0.098203406 0.092200106
[1255] 0.276836602 0.158867241 0.024506853 0.913690703 0.825915327 0.466381281
[1261] 0.188049575 0.138568917 0.047422282 0.350357668 0.550275881 0.028483346
[1267] 0.579741052 0.198032464 0.098686879 0.071121250 0.016904165 0.016528004
[1273] 0.237692061 0.544143570 0.244477937 0.561946664 0.857633281 0.391553531
[1279] 0.068581567 0.820119947 0.482513121 0.623873626 0.017574830 0.550723460
[1285] 0.645026111 0.029536691 0.046583725 0.938973138 0.029515859 0.025669868
[1291] 0.023881901 0.098975644 0.084906615 0.309014016 0.449674461 0.017673046
[1297] 0.063395759 0.322507087 0.065150786 0.102126984 0.807812564 0.124400831
[1303] 0.083723296 0.408257490 0.891090825 0.112944810 0.155922551 0.030248285
[1309] 0.019502830 0.535084114 0.016556483 0.026968324 0.022190314 0.020018380
[1315] 0.033364069 0.031521638 0.023476765 0.031006722 0.358744702 0.036393144
[1321] 0.101954544 0.689508740 0.015358008 0.563529554 0.017240321 0.176988838
[1327] 0.586119890 0.212803185 0.392566920 0.490574085 0.719714637 0.100648485
[1333] 0.109226669 0.019222997 0.627020454 0.018779059 0.019777469 0.115334148
[1339] 0.266561865 0.407070973 0.075903696 0.636314494 0.041323979 0.029274115
[1345] 0.678973909 0.535941763 0.630698211 0.700171649 0.542139428 0.015515533
[1351] 0.081831106 0.094770140 0.488980744 0.487430793 0.840053971 0.029718002
[1357] 0.518009682 0.779559123 0.397043254 0.939024861 0.347962649 0.218689110
[1363] 0.012462160 0.112913910 0.762448547 0.021286768 0.113133965 0.114711280
[1369] 0.098196760 0.691610515 0.733357447 0.329474798 0.131123187 0.014196507
[1375] 0.055090492 0.231869683 0.027076796 0.133473194 0.028697732 0.017003715
[1381] 0.016353024 0.072999136 0.028150274 0.012496452 0.025541952 0.670058574
[1387] 0.059630174 0.317696734 0.154374589 0.873814842 0.031971259 0.102246471
[1393] 0.027809714 0.036287137 0.617921947 0.475973333 0.745546013 0.594215726
[1399] 0.955317642 0.021090175 0.102466551 0.990352494 0.484542634 0.018510526
[1405] 0.560306363 0.055091835 0.717498470 0.113894078 0.163192314 0.145995304
[1411] 0.038937218 0.468618682 0.063026175 0.045232249 0.021269369 0.934804016
[1417] 0.231722429 0.360193124 0.149999162 0.258444964 0.341070185 0.393631466
[1423] 0.018223787 0.200179496 0.334412172 0.614556203 0.047537033 0.018698339
[1429] 0.426544777 0.081372717 0.405271843 0.161330134 0.017256266 0.023651578
[1435] 0.685701902 0.306579456 0.061016281 0.022939332 0.288404401 0.195434138
[1441] 0.073206980 0.758743969 0.159966743 0.906690715 0.767229625 0.464870521
[1447] 0.900817075 0.462150758 0.037642212 0.049655813 0.019234897 0.024681680
[1453] 0.028995169 0.927856649 0.537144218 0.014347028 0.513294093 0.282278655
[1459] 0.914408882 0.281205072 0.416190757 0.028980303 0.097741822 0.430889125
[1465] 0.272665698 0.598854143 0.607696031 0.142373039 0.362869980 0.021077710
[1471] 0.771559218 0.022789424 0.113691078 0.024861278 0.494914353 0.032053393
[1477] 0.120552911 0.027822240 0.449064028 0.544339903 0.516849534 0.869074760
[1483] 0.077003188 0.832759021 0.035994812 0.860416521 0.044765501 0.128285348
[1489] 0.127418253 0.093224351 0.015557170 0.096018167 0.056404454 0.064033777
[1495] 0.027646495 0.549600388 0.467910248 0.028286981 0.036522563 0.154768678
[1501] 0.083119177 0.085667499 0.651759412 0.839615583 0.041465003 0.092492906
[1507] 0.791039889 0.583424569 0.472938039 0.034768207 0.020576507 0.028721299
[1513] 0.049527004 0.095574170 0.631204843 0.103563486 0.012986713 0.937701885
[1519] 0.044086382 0.067354506 0.022218656 0.429479208 0.074303962 0.102010229
[1525] 0.646365099 0.321915894 0.014184456 0.077196156 0.148484933 0.123392158
[1531] 0.017226092 0.058649956 0.595123909 0.289089591 0.279913246 0.832230765
[1537] 0.849647367 0.028134737 0.052425993 0.111775668 0.865824316 0.469859389
[1543] 0.355798049 0.027581642 0.129195236 0.571880008 0.956421734 0.921624021
[1549] 0.045649966 0.739618188 0.414422925 0.027771903 0.478741789 0.013244541
[1555] 0.629900713 0.958014460 0.068919607 0.046289559 0.301708982 0.141812142
[1561] 0.019813586 0.033020917 0.018771846 0.699301715 0.472711626 0.075658315
[1567] 0.554787885 0.102211782 0.016927126 0.018313813 0.120105170 0.901803237
[1573] 0.036836814 0.509174343 0.658620293 0.029420013 0.028780621 0.088063849
[1579] 0.089911582 0.195588494 0.798972333 0.068550509 0.475836076 0.468003044
[1585] 0.460160472 0.129530664 0.414788331 0.427438366 0.027940103 0.122042275
[1591] 0.543158110 0.018516636 0.027776706 0.015347813 0.918508446 0.072431218
[1597] 0.682966295 0.082798845 0.168876445 0.021015865 0.494868601 0.453081258
[1603] 0.078807089 0.069656216 0.904999871 0.022448967 0.170111151 0.630044275
[1609] 0.931939062 0.133230131 0.681895514 0.047642060 0.018850623 0.425498895
[1615] 0.020284941 0.399384095 0.018437111 0.018826039 0.477257238 0.322508395
[1621] 0.019099983 0.159805151 0.068030967 0.390736826 0.027177081 0.074401251
[1627] 0.020750256 0.111105220 0.047328218 0.737617388 0.390268446 0.034074384
[1633] 0.033989580 0.940621913 0.036023436 0.036403656 0.020058907 0.023112640
[1639] 0.040828664 0.586138037 0.030175336 0.015986223 0.016640274 0.945435866
[1645] 0.327641718 0.784816845 0.119099695 0.110763536 0.028862094 0.125887570
[1651] 0.428880814 0.052667732 0.017786674 0.381633248 0.754063763 0.368737757
[1657] 0.480438152 0.567061985 0.541205429 0.025437757 0.438140838 0.155314248
[1663] 0.078692137 0.064819390 0.016131787 0.070457505 0.377684895 0.052268105
[1669] 0.035112595 0.402379480 0.139148703 0.587847806 0.667577861 0.069152567
[1675] 0.596107569 0.026795898 0.149202861 0.087777028 0.160687894 0.029095283
[1681] 0.628340419 0.100770734 0.031165491 0.960741233 0.392625458 0.507002141
[1687] 0.912692883 0.019179598 0.024358670 0.407926354 0.485649553 0.425221183
[1693] 0.088254235 0.567611132 0.426286476 0.045702476 0.137398781 0.835458868
[1699] 0.017621080 0.015429398 0.348124756 0.036766454 0.984419846 0.038429246
[1705] 0.066332435 0.098202683 0.446996853 0.865640565 0.047755861 0.359197441
[1711] 0.603118527 0.643651294 0.012508364 0.052851808 0.064956143 0.627676156
[1717] 0.838629523 0.100322836 0.092129682 0.094744600 0.209534996 0.463582074
[1723] 0.041815486 0.403424050 0.043916034 0.619730245 0.017235392 0.222687581
[1729] 0.793411501 0.029030255 0.600049599 0.083815078 0.022599015 0.518075663
[1735] 0.037190733 0.123129396 0.546183739 0.018076720 0.455675152 0.091915507
[1741] 0.197768737 0.083173777 0.761387028 0.017208362 0.146776372 0.597502420
[1747] 0.410973542 0.040460390 0.144166022 0.155143720 0.551502207 0.061167815
[1753] 0.777281445 0.029509976 0.020075593 0.116859456 0.980337889 0.893107078
[1759] 0.022696719 0.661387744 0.149686881 0.014882305 0.626281925 0.016016450
[1765] 0.084183055 0.066764696 0.556040813 0.465460993 0.495859650 0.032247675
[1771] 0.016320664 0.202201222 0.019140434 0.018784156 0.102246744 0.070418058
[1777] 0.019642741 0.913107049 0.111041879 0.447196683 0.103635963 0.572834704
[1783] 0.128125768 0.017722641 0.026827827 0.742656720 0.687262717 0.198106760
[1789] 0.027949266 0.325229622 0.633596503 0.140818411 0.020679706 0.017412070
[1795] 0.017751688 0.021546275 0.564515220 0.393783932 0.835146111 0.402622162
[1801] 0.554165721 0.484026731 0.225418903 0.021293047 0.488005877 0.861791402
[1807] 0.544922487 0.084000396 0.459287232 0.518041301 0.029904720 0.391000198
[1813] 0.212050245 0.587157674 0.942381233 0.016238511 0.063709809 0.599551168
[1819] 0.725133300 0.085610904 0.118482102 0.109780219 0.071067762 0.428306139
[1825] 0.021378904 0.036251646 0.023640125 0.035842442 0.017479521 0.530950617
[1831] 0.431006112 0.693824805 0.096577345 0.103793537 0.020730712 0.327065771
[1837] 0.023218540 0.081857718 0.018805447 0.154902693 0.016708993 0.046858838
[1843] 0.057517078 0.028518794 0.120565516 0.611807176 0.058656960 0.855432614
[1849] 0.661050086 0.041999251 0.034311469 0.387136106 0.024656416 0.202133618
[1855] 0.016445797 0.024365015 0.939047602 0.627515380 0.089740579 0.827687512
[1861] 0.046085480 0.010962352 0.032636917 0.023070935 0.029178170 0.013964735
[1867] 0.086360194 0.440926118 0.367582756 0.026784590 0.193781266 0.026147967
[1873] 0.029350819 0.070524440 0.020984117 0.025178784 0.599751372 0.881773188
[1879] 0.004559037 0.083384111 0.017561105 0.478035128 0.263575368 0.095591150
[1885] 0.735712258 0.026160580 0.103794805 0.058977099 0.984898509 0.025827219
[1891] 0.087559122 0.013709203 0.050735121 0.656756006 0.092336581 0.683564164
[1897] 0.091720421 0.304941659 0.336570914 0.203049673 0.029622278 0.176168931
[1903] 0.100559527 0.163694539 0.250162228 0.809956800 0.445467849 0.022859854
[1909] 0.080958137 0.654548345 0.023454502 0.040363880 0.398447125 0.068899757
[1915] 0.070815152 0.043508438 0.113018354 0.108244505 0.143131462 0.019152018
[1921] 0.351054278 0.017627954 0.108856926 0.246341517 0.066062063 0.537073267
[1927] 0.086012064 0.184385357 0.572258226 0.567031014 0.022894747 0.740825195
[1933] 0.510810259 0.037309267 0.093792012 0.406858422 0.277827609 0.075463596
[1939] 0.034479311 0.029960211 0.792653497 0.018610236 0.049066855 0.244629408
[1945] 0.136590592 0.030509216 0.089577086 0.084699941 0.514551847 0.061441433
[1951] 0.939726264 0.609441941 0.076351831 0.232337105 0.017172343 0.052986433
[1957] 0.885133604 0.227741099 0.695527675 0.252835033 0.015791681 0.018053278
[1963] 0.150167604 0.013870573 0.021858799 0.089069829 0.025319596 0.151977446
[1969] 0.541147588 0.103291276 0.201497755 0.558154190 0.025775500 0.340262175
[1975] 0.025202798 0.238302240 0.018342620 0.176104120 0.033768402 0.788186637
[1981] 0.034641983 0.461830431 0.016474123 0.096669876 0.622058571 0.003346697
[1987] 0.067703009 0.631833160 0.099768326 0.271675131 0.419393070 0.167559648
[1993] 0.205140508 0.897658611 0.027139887 0.160820577 0.018012689 0.012716166
[1999] 0.675331038 0.105238328 0.271212328 0.088272470 0.624333514 0.387748931
[2005] 0.329753423 0.236928360 0.087122382 0.039221240 0.511445298 0.495425127
[2011] 0.427519051 0.026364683 0.029637456 0.062540773 0.640950650 0.047598633
[2017] 0.486492567 0.116534688 0.271416362 0.816406972 0.606161787 0.551487082
[2023] 0.020828329 0.080298861 0.028992402 0.134185581 0.102805563 0.739393167
[2029] 0.188014137 0.016015720 0.018974687 0.028816194 0.298856624 0.017088846
[2035] 0.098662587 0.259083853 0.847557101 0.555085707 0.923525296 0.814835030
[2041] 0.018797605 0.107747300 0.912775933 0.667589611 0.069613363 0.023139174
[2047] 0.066390501 0.104700358 0.082615714 0.161063481 0.534703227 0.028530764
[2053] 0.095936985 0.045973488 0.261291906 0.945229877 0.761780542 0.031728266
[2059] 0.021580067 0.172735771 0.156119252 0.468190629 0.250940613 0.797729255
[2065] 0.037029138 0.022042745 0.033373503 0.399039182 0.112270298 0.025532642
[2071] 0.017546768 0.796214664 0.117000290 0.746594480 0.070532569 0.020257105
[2077] 0.256414016 0.512123498 0.244362351 0.263731970 0.751179154 0.945204721
[2083] 0.107937366 0.089073628 0.246924158 0.073690839 0.028608695 0.570649461
[2089] 0.025421663 0.940895838 0.439643197 0.185306170 0.023921755 0.067075165
[2095] 0.741686231 0.498177890 0.018196946 0.425091464 0.183986500 0.021305669
[2101] 0.041081714 0.026506124 0.866812776 0.024571981 0.041429288 0.021578099
[2107] 0.019496633 0.021342917 0.032663641 0.348712560 0.094333173 0.466174454
[2113] 0.089333539 0.278275010 0.625367146 0.820859822 0.035321935 0.016754747
[2119] 0.195577537 0.011697153 0.478401561 0.676813611 0.021880259 0.128555991
[2125] 0.305315671 0.017738486 0.098306361 0.715633341 0.025621318 0.066970078
[2131] 0.593681335 0.149567984 0.032711304 0.083936354 0.069203654 0.039142531
[2137] 0.436678905 0.116973713 0.065243522 0.018658374 0.024595288 0.505511753
[2143] 0.136025837 0.484369393 0.115029221 0.564644911 0.606721360 0.016449569
[2149] 0.053146950 0.912142665 0.033685860 0.058170608 0.062286886 0.498185238
[2155] 0.021735315 0.085892034 0.016635546 0.099302871 0.490539701 0.030530183
[2161] 0.028881074 0.055779051 0.848371520 0.216665057 0.618345705 0.526333599
[2167] 0.281102032 0.024283286 0.170398218 0.015612746 0.176897979 0.839556314
[2173] 0.029768085 0.435488709 0.378862761 0.026518651 0.254527096 0.024022658
[2179] 0.425458429 0.155074386 0.029895580 0.521393387 0.144841966 0.761900772
[2185] 0.030817420 0.078381731 0.407619478 0.019436815 0.089130945 0.026945169
[2191] 0.023773062 0.430716110 0.014454041 0.471282279 0.023721756 0.164150244
[2197] 0.025964544 0.158245583 0.724976233 0.091214756 0.238940159 0.042177400
[2203] 0.072457949 0.017046861 0.219678993 0.079774383 0.051562646 0.023925748
[2209] 0.057026105 0.021351859 0.237677325 0.052482828 0.032022377 0.392750954
[2215] 0.301631688 0.075703070 0.060302045 0.046309060 0.070212742 0.020077582
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[4759] 0.533902967 0.914185950 0.067338571 0.014746927 0.033528676 0.514781875
[4765] 0.082488355 0.011578128 0.585758127 0.135329658 0.078212418 0.023025155
[4771] 0.162783021 0.388083694 0.356611552 0.019587524 0.052015861 0.105527911
[4777] 0.034868148 0.022001625 0.216987034 0.394641551 0.094668772 0.205887154
[4783] 0.730162537 0.755953427 0.092875542 0.500402159 0.032457463 0.531259254
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[4801] 0.063094833 0.350862115 0.112308551 0.481642727 0.223600726 0.195203917
[4807] 0.044880794 0.506631947 0.959050754 0.293241236 0.748866760 0.022692404
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[4819] 0.028402603 0.122110445 0.464119468 0.014562286 0.648246238 0.014569264
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[4861] 0.313313425 0.057274591 0.054040421 0.034871892 0.013400014 0.013916506
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[4873] 0.103160253 0.121250207 0.030553873 0.157489550 0.794075174 0.230055683
[4879] 0.048096323 0.179712250 0.023579420 0.044353949 0.929945835 0.020493819
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[4915] 0.248606182 0.892858734 0.545967723 0.029777492 0.205752522 0.020879448
[4921] 0.447551108 0.218177820 0.110870033 0.466994120 0.829926717 0.017657890
[4927] 0.159802209 0.403997121 0.672140092 0.315506873 0.905287997 0.530638356
[4933] 0.592720871 0.109129262 0.046779338 0.472721280 0.382163753 0.212200977
[4939] 0.570111163 0.289538129 0.028757248 0.433404669 0.028902242 0.241355845
[4945] 0.387874153 0.322078591 0.066552847 0.017726276 0.031029196 0.019317320
[4951] 0.808208603 0.026079852 0.026226309 0.650995667 0.640983786 0.603783356
[4957] 0.397374672 0.028167651 0.935934887 0.017492406 0.123344635 0.114830014
[4963] 0.891529985 0.018420617 0.019485302 0.092922316 0.232494789 0.423678692
[4969] 0.034250011 0.596906567 0.640929647 0.084198174 0.263008479 0.072192898
[4975] 0.076420169 0.099380050 0.018571883 0.068448125 0.340956518 0.590993644
[4981] 0.974801980 0.075126330 0.071112495 0.460366941 0.529732084 0.451962216
[4987] 0.024378276 0.294013932 0.029480277 0.150610887 0.054779816 0.021400661
[4993] 0.028577213 0.147985799 0.021540423 0.023407051 0.402143144 0.104572547
[4999] 0.024436447 0.037408023 0.040640301 0.664301876 0.147900583 0.643793091
[5005] 0.027426713 0.818962860 0.629447204 0.030251601 0.906319974 0.048715980
[5011] 0.744221760 0.018437318 0.020971865 0.594945853 0.602094426 0.146121353
[5017] 0.108734093 0.021635039 0.825985715 0.449723610 0.937160575 0.049267803
[5023] 0.038906525 0.032947393 0.088903634 0.036648905 0.708297729 0.022621496
[5029] 0.403721754 0.123134856 0.023621952 0.020156981 0.145593315 0.027482937
[5035] 0.035470397 0.136705853 0.658336105 0.024069503 0.056391972 0.149082838
[5041] 0.037935000 0.061119694 0.188939427 0.354617975 0.798737532 0.036849549
[5047] 0.069644175 0.037495721 0.047777601 0.610522782 0.549330599 0.067210586
[5053] 0.015497152 0.283791178 0.608091594 0.880775649 0.026646627 0.230438434
[5059] 0.431537811 0.047406414 0.475325318 0.162639064 0.408539400 0.329827541
[5065] 0.133309346 0.979162053 0.025018788 0.036899110 0.078353259 0.013500295
[5071] 0.077033901 0.807380644 0.069154645 0.039190054 0.073931954 0.615707653
[5077] 0.075316166 0.018530686 0.364606739 0.099166016
sh: 1: awk: Permission denied
class      : RasterLayer 
dimensions : 192, 186, 35712  (nrow, ncol, ncell)
resolution : 0.5, 0.5  (x, y)
extent     : -125, -32, -56, 40  (xmin, xmax, ymin, ymax)
crs        : +proj=longlat +datum=WGS84 +no_defs 
source     : /work/tmp/tmp/RtmpZnLAmO/raster/r_tmp_2021-03-08_145533_1626213_53052.tif 
names      : r_tmp_2021.03.08_145533_1626213_53052 
values     : 0.002530278, 0.8535942  (min, max)

sh: 1: awk: Permission denied
class      : RasterLayer 
dimensions : 192, 186, 35712  (nrow, ncol, ncell)
resolution : 0.5, 0.5  (x, y)
extent     : -125, -32, -56, 40  (xmin, xmax, ymin, ymax)
crs        : +proj=longlat +datum=WGS84 +no_defs 
source     : /work/tmp/my_map.tif 
names      : my_map 
values     : 0.002530278, 0.8535942  (min, max)

SDMtune documentation built on July 17, 2021, 9:06 a.m.