calc_Mheavymax_MAGs: Calculate Mheavymax
In SIPmg: Statistical Analysis to Identify Isotope Incorporating MAGs
View source: R/functions_qSIP_MAGs.R
calc_Mheavymax_MAGs R Documentation
Calculate Mheavymax
Description
This script was adapted from https://github.com/buckleylab/HTSSIP/blob/master/R/qSIP_atom_excess.R
for use with genome-centric metagenomics. See Hungate et al., 2015 for more details
Usage
calc_Mheavymax_MAGs(Mlight, isotope = "13C", Gi = Gi)
Arguments
Mlight
The molecular wight of unlabeled DNA
isotope
The isotope for which the DNA is labeled with ('13C' or '18O')
Gi
The G+C content of unlabeled DNA
Value
numeric value: maximum molecular weight of fully-labeled DNA
SIPmg documentation built on March 7, 2023, 6:47 p.m.
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View source: R/functions_qSIP_MAGs.R
| calc_Mheavymax_MAGs | R Documentation |
Calculate Mheavymax
Description
This script was adapted from https://github.com/buckleylab/HTSSIP/blob/master/R/qSIP_atom_excess.R for use with genome-centric metagenomics. See Hungate et al., 2015 for more details
Usage
calc_Mheavymax_MAGs(Mlight, isotope = "13C", Gi = Gi)
Arguments
Mlight |
The molecular wight of unlabeled DNA |
isotope |
The isotope for which the DNA is labeled with ('13C' or '18O') |
Gi |
The G+C content of unlabeled DNA |
Value
numeric value: maximum molecular weight of fully-labeled DNA
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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