qSIP_atom_excess_format_MAGs: Reformat a phyloseq object of qSIP_atom_excess_MAGs analysis
In SIPmg: Statistical Analysis to Identify Isotope Incorporating MAGs
View source: R/functions_qSIP_MAGs.R
qSIP_atom_excess_format_MAGs R Documentation
Reformat a phyloseq object of qSIP_atom_excess_MAGs analysis
Description
Reformat a phyloseq object of qSIP_atom_excess_MAGs analysis
Usage
qSIP_atom_excess_format_MAGs(physeq, control_expr, treatment_rep)
Arguments
physeq
A phyloseq object
control_expr
An expression for identifying unlabeled control
samples in the phyloseq object (eg., "Substrate=='12C-Con'")
treatment_rep
Which column in the phyloseq sample data designates
replicate treatments
Value
numeric value: atom fraction excess (A)
SIPmg documentation built on March 7, 2023, 6:47 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/functions_qSIP_MAGs.R
| qSIP_atom_excess_format_MAGs | R Documentation |
Reformat a phyloseq object of qSIP_atom_excess_MAGs analysis
Description
Reformat a phyloseq object of qSIP_atom_excess_MAGs analysis
Usage
qSIP_atom_excess_format_MAGs(physeq, control_expr, treatment_rep)
Arguments
physeq |
A phyloseq object |
control_expr |
An expression for identifying unlabeled control samples in the phyloseq object (eg., "Substrate=='12C-Con'") |
treatment_rep |
Which column in the phyloseq sample data designates replicate treatments |
Value
numeric value: atom fraction excess (A)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.