|assign_branches||Detect branches in the trajectory and assign cells to...|
|cell_order||Sort cells according to their progress through a process|
|compute_geodesic_entropy||Compute the geodesic entropy profile of a trajectory|
|conn_knn_graph||Construct a k-nearest neighbor graph that is fully connected|
|detect_cell_types||Identify clusters corresponding to putative cell types|
|find_extreme_cells||Identify candidate start cells for the trajectory|
|graph_gene||Plot trajectory colored by expression level of a gene|
|graph_process_distance||Plot trajectory colored by process distance|
|process_distance||Determine the position of each cell within the trajectory|
|select_genes||Select genes to use in building a cell trajectory|
|select_k||Select the number of nearest neighbors for LLE to use|
|traj||This is a dataset containing a synthetic branching...|
|width_k||Helper function for k selection|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.