Files in SNPfiltR
Interactively Filter SNP Datasets
MD5
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/SNPfiltR.R
R/max_depth.R
R/assess_missing_data_tsne.R
R/assess_missing_data_pca.R
R/filter_allele_balance.R
R/min_mac.R
R/filter_biallelic.R
R/distance_thin.R
R/example_data.R
R/zzz.R
R/missing_by_snp.R
R/hard_filter.R
R/missing_by_sample.R
inst/doc/reproducible-vignette.Rmd
inst/doc/reproducible-vignette.html
inst/doc/reproducible-vignette.R
inst/extdata/RMarkdown.qc.submit.script.sh
inst/extdata/make.benchmarking.vcfs.R
inst/extdata/rhub.check.package.R
inst/extdata/make.toy.vcfR.dataset.R
inst/extdata/fastqcr.Rmd
build/vignette.rds
tests/testthat/test-distance_thin.R
tests/testthat/test-hard_filter.R
tests/testthat/test-min_mac.R
tests/testthat/testthat.R
tests/testthat/test-max_depth.R
tests/testthat/test-assess_missing_data_pca.R
tests/testthat/test-assess_missing_data_tsne.R
tests/testthat/test-missing_by_sample.R
tests/testthat/test-allele_balance.R
tests/testthat/test-missing_by_snp.R
tests/testthat/test-filter_biallelic.R
vignettes/reproducible-vignette.Rmd
data/vcfR.example.rda
data/popmap.rda
man/vcfR.example.Rd
man/popmap.Rd
man/max_depth.Rd
man/missing_by_sample.Rd
man/hard_filter.Rd
man/distance_thin.Rd
man/filter_allele_balance.Rd
man/min_mac.Rd
man/SNPfiltR.Rd
man/assess_missing_data_pca.Rd
man/assess_missing_data_tsne.Rd
man/missing_by_snp.Rd
man/filter_biallelic.Rd
man/figures/make.logo.R
