SVGTest: Compute the spatial variable genes of a SpaCoObject after...
In SPACO: Spatial Component Analysis for Spatial Sequencing Data
View source: R/EvalFunctions.R
SVGTest R Documentation
Compute the spatial variable genes of a SpaCoObject after runinng runSCA
Description
Compute the spatial variable genes of a SpaCoObject after runinng runSCA
Usage
SVGTest(SpaCoObject, adjustMethod = "holm")
Arguments
SpaCoObject
SpaCoObject to compute spatially variable genes of.
adjustMethod
method for p-value adjustment. See p.adjust function.
Value
returns a data frame of spatial variable genes and their p-Values.
SPACO documentation built on March 31, 2026, 5:07 p.m.
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View source: R/EvalFunctions.R
| SVGTest | R Documentation |
Compute the spatial variable genes of a SpaCoObject after runinng runSCA
Description
Compute the spatial variable genes of a SpaCoObject after runinng runSCA
Usage
SVGTest(SpaCoObject, adjustMethod = "holm")
Arguments
SpaCoObject |
SpaCoObject to compute spatially variable genes of. |
adjustMethod |
method for p-value adjustment. See p.adjust function. |
Value
returns a data frame of spatial variable genes and their p-Values.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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