subset_non_neighbour_cells: Filtering function to remove cells without neighbours in...
In SPACO: Spatial Component Analysis for Spatial Sequencing Data
View source: R/Seuratwrappers.R
subset_non_neighbour_cells R Documentation
Filtering function to remove cells without neighbours in defined distance from existing Seurat object to be conformable with existing SpaCoObject.
Description
Filtering function to remove cells without neighbours in defined distance from existing Seurat object to be conformable with existing SpaCoObject.
Usage
subset_non_neighbour_cells(SpaCoObject, SeuratObject)
Arguments
SpaCoObject
SpaCoObject to integrate into Seurat object.
SeuratObject
Seurat object to be filtered.
Value
Returns a Seurat object with cells filtered to match SpaCoObject.
SPACO documentation built on March 31, 2026, 5:07 p.m.
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View source: R/Seuratwrappers.R
| subset_non_neighbour_cells | R Documentation |
Filtering function to remove cells without neighbours in defined distance from existing Seurat object to be conformable with existing SpaCoObject.
Description
Filtering function to remove cells without neighbours in defined distance from existing Seurat object to be conformable with existing SpaCoObject.
Usage
subset_non_neighbour_cells(SpaCoObject, SeuratObject)
Arguments
SpaCoObject |
SpaCoObject to integrate into Seurat object. |
SeuratObject |
Seurat object to be filtered. |
Value
Returns a Seurat object with cells filtered to match SpaCoObject.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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