msi.dataset-class: msi.dataset-class S4 class definition containing the...
In SPUTNIK: Spatially Automatic Denoising for Imaging Mass Spectrometry Toolkit
msi.dataset-class R Documentation
msi.dataset-class S4 class definition containing the information about
the mass spectrometry imaging dataset.
Description
msi.dataset-class S4 class definition containing the information about
the mass spectrometry imaging dataset.
Slots
matrixthe peaks intensity matrix. Rows represent pixels, and columns
represent peaks.
mzvector of matched m/z values.
nrowgeometrical shape (number of rows) of image.
ncolgeometrical shape (number of columns) of image.
normnormalization method.
normoffsetnumeric offset used for the normalization.
vartrvariance stabilizing transformation.
vartroffsetnumeric offset used for the variance stabilizing transformation.
numdetectedmsImage of number of detected peaks.
totalioncountmsImage of total-ion-count per pixel.
Author(s)
Paolo Inglese p.inglese14@imperial.ac.uk
SPUTNIK documentation built on May 29, 2024, 11:53 a.m.
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| msi.dataset-class | R Documentation |
msi.dataset-class S4 class definition containing the information about the mass spectrometry imaging dataset.
Description
msi.dataset-class S4 class definition containing the information about the mass spectrometry imaging dataset.
Slots
matrixthe peaks intensity matrix. Rows represent pixels, and columns represent peaks.
mzvector of matched m/z values.
nrowgeometrical shape (number of rows) of image.
ncolgeometrical shape (number of columns) of image.
normnormalization method.
normoffsetnumeric offset used for the normalization.
vartrvariance stabilizing transformation.
vartroffsetnumeric offset used for the variance stabilizing transformation.
numdetectedmsImage of number of detected peaks.
totalioncountmsImage of total-ion-count per pixel.
Author(s)
Paolo Inglese p.inglese14@imperial.ac.uk
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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