plot_layout: Plot layout of a 96-well plate

In SerolyzeR: Reading, Quality Control and Preprocessing of MBA (Multiplex Bead Assay) Data

Plot layout of a 96-well plate

Description

This function plots the layout of a 96-well plate using a colour to represent the sample types.

If the plot window is resized, it's best to re-run the function to adjust the scaling. Sometimes, the whole layout may be shifted when a legend is plotted. It's best to stretch the window, and everything will be adjusted automatically.

Usage

plot_layout(plate, plot_legend = TRUE)

Arguments

plate	The plate object with the layout information
plot_legend	Logical indicating if the legend should be plotted

Value

A ggplot object

Examples

plate_filepath <- system.file("extdata", "CovidOISExPONTENT_CO.csv",
  package = "SerolyzeR", mustWork = TRUE
)
layout_filepath <- system.file("extdata", "CovidOISExPONTENT_CO_layout.xlsx",
  package = "SerolyzeR", mustWork = TRUE
)
plate <- read_luminex_data(plate_filepath, layout_filepath)
plot_layout(plate = plate, plot_legend = TRUE)

SerolyzeR documentation built on April 12, 2025, 2:11 a.m.