plot_plate: Plot a 96-well plate with coloured wells

In SerolyzeR: Reading, Quality Control and Preprocessing of MBA (Multiplex Bead Assay) Data

Plot a 96-well plate with coloured wells

Description

It is a generic function to plot a 96-well plate with coloured wells used by other functions in this package, mainly to plot layout and counts. The function uses a background image of a 96-well plate and plots the colours in the wells using ggplot2. This function is not intended for the user to use directly. Rather, it is used by other functions specified in this file.

Usage

plot_plate(
  colours,
  plot_numbers = FALSE,
  numbers = NULL,
  plot_title = "Plate",
  plot_legend = FALSE,
  legend_mapping = NULL
)

Arguments

colours	A vector with 96 colours will be used to colour the wells; the order is from left to right and top to bottom
plot_numbers	Logical value indicating if the well numbers should be plotted, default is FALSE
numbers	An optional vector with 96 numbers plotted on the wells. Order is from left to right and top to bottom and must have the same length as colours. It could be used, for instance, to plot the bead count of each well. Must be provided in case the plot_numbers parameter is set to TRUE
plot_title	The title of the plot (default is "Plate")
plot_legend	Logical value indicating if the legend should be plotted, default is FALSE
legend_mapping	A named vector with the colour mapping used to create the legend

Value

A ggplot object

SerolyzeR documentation built on April 12, 2025, 2:11 a.m.