Files in SignacX
Cell Type Identification and Discovery from Single Cell Gene Expression Data
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/ModelGenerator.R
R/MASC.R
R/SignacFast.R
R/data.R
R/KSoftImpute.R
R/Signac.R
R/helper_functions.R
inst/CITATION
inst/doc/signac-Seurat_AMP_RA.html
inst/doc/signac-Seurat_AMP.Rmd
inst/doc/signac-Seurat_pbmcs.html
inst/doc/signac-Seurat_AMP.html
inst/doc/Crabeating_vignette.Rmd
inst/doc/Crabeating_vignette.html
inst/doc/signac-SPRING_Learning.html
inst/doc/signac-Seurat_AMP_RA.Rmd
inst/doc/signac-Seurat_CITE-seq.html
inst/doc/SignacFast-Seurat_AMP_RA.Rmd
inst/doc/SignacFast-Seurat_AMP_RA.html
inst/doc/signac-SPRING_Learning.Rmd
inst/doc/signac-Seurat_pbmcs.Rmd
inst/doc/signac-Seurat_CITE-seq.Rmd
build/vignette.rds
vignettes/signac-Seurat_AMP.Rmd
vignettes/Crabeating_vignette.Rmd
vignettes/signac-Seurat_AMP_RA.Rmd
vignettes/SignacFast-Seurat_AMP_RA.Rmd
vignettes/signac-SPRING_Learning.Rmd
vignettes/signac-Seurat_pbmcs.Rmd
vignettes/signac-Seurat_CITE-seq.Rmd
vignettes/fls/plot4_amp.png
vignettes/fls/plot3_citeseq.png
vignettes/fls/plot1.png
vignettes/fls/features.tsv.gz
vignettes/fls/celltypes.rds
vignettes/fls/celltypes_amp_synovium.rds
vignettes/fls/amp_kidney_MASC_result.rds
vignettes/fls/plot6_citeseq.png
vignettes/fls/plot5.png
vignettes/fls/celltypes_fast.rds
vignettes/fls/plot3.png
vignettes/fls/celltypes_fast_synovium_celltypes.rds
vignettes/fls/celltypes_citeseq.rds
vignettes/fls/plot4.png
vignettes/fls/plot4_citeseq.png
vignettes/fls/SingleR_Results.rda
vignettes/fls/plot2_amp.png
vignettes/fls/plot2.png
vignettes/fls/plot3_amp.png
vignettes/fls/amp_kidney_celltypes.rds
vignettes/fls/orthologs.rds
vignettes/fls/plot1_amp.png
vignettes/fls/plot2_citeseq.png
vignettes/fls/tutorial_times_Crabeating_vignette.csv
vignettes/fls/plot9_citeseq.png
vignettes/fls/plot1_citeseq.png
vignettes/fls/plot6.png
vignettes/fls/celltypes_fast_citeseq.rds
vignettes/fls/celltypes_amp_synovium_true.rds
vignettes/fls/plot5_citeseq.png
vignettes/fls/plot7_citeseq.png
data/Genes_Of_Interest.rda
man/MASC.Rd
man/CID.LoadData.Rd
man/CID.smooth.Rd
man/GenerateLabels.Rd
man/Genes_Of_Interest.Rd
man/CID.IsUnique.Rd
man/CID.GetDistMat.Rd
man/GetModels_HPCA.Rd
man/SignacFast.Rd
man/KSoftImpute.Rd
man/GetTrainingData_HPCA.Rd
man/CID.writeJSON.Rd
man/CID.LoadEdges.Rd
man/SaveCountsToH5.Rd
man/CID.entropy.Rd
man/CID.Normalize.Rd
man/Signac.Rd
man/ModelGenerator.Rd
man/SignacBoot.Rd
man/get_colors.Rd
man/CID.Louvain.Rd
