Livestock movements are important for the spread of many infectious diseases between herds. The package provides an efficient and flexible framework for stochastic disease spread modelling that integrates within-herd disease dynamics as continuous-time Markov chains and livestock movements between herds as scheduled events. The core simulation solver is implemented in C and uses 'OpenMP' (if available) to divide work over multiple processors. The package contains template models and can be extended with user defined models.
|Author||Stefan Widgren (National Veterinary Institute, Sweden and Uppsala University, Sweden), Pavol Bauer (Uppsala University, Sweden), Stefan Engblom (Uppsala University, Sweden)|
|Date of publication||2017-06-13 14:41:21 UTC|
|Maintainer||Stefan Widgren <email@example.com>|
|Package repository||View on CRAN|
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