API for SimInf
A Framework for Data-Driven Stochastic Disease Spread Simulations

Global functions
C_code Man page
C_code,SimInf_mparse,character-method Man page
C_code,SimInf_mparse,missing-method Man page
C_code_mparse Source code
C_compartments Source code
C_heading Source code
C_include Source code
C_ptsFun Source code
C_rate_constants Source code
C_run Source code
C_trFun Source code
LaTeX Source code
Nc Source code
Nd Source code
Nn Source code
Nt Source code
SEIR Man page Source code
SEIR-class Man page
SIR Man page Source code
SIR-class Man page
SISe Man page Source code
SISe-class Man page
SISe3 Man page Source code
SISe3-class Man page
SISe3_sp Man page Source code
SISe3_sp-class Man page
SISe_sp Man page Source code
SISe_sp-class Man page
SimInf Man page
SimInf-package Man page
SimInf_events Man page Source code
SimInf_events-class Man page
SimInf_model Man page Source code
SimInf_model-class Man page
SimInf_mparse-class Man page
U Man page
U,SimInf_model-method Man page
U<- Man page
U<-,SimInf_model-method Man page
V Man page
V,SimInf_model-method Man page
V<- Man page
V<-,SimInf_model-method Man page
as_labels Source code
boxplot Man page
boxplot,SimInf_model-method Man page
boxplot-methods Man page
by_compartment Source code
calc_prevalence Source code
check_end_t_arg Man page Source code
check_gdata_arg Man page Source code
check_infectious_pressure_arg Man page Source code
check_integer_arg Man page Source code
create_DESCRIPTION_file Source code
create_NAMESPACE_file Source code
create_model_C_file Source code
create_model_R_class Source code
create_model_R_file Source code
create_model_R_object Source code
create_model_class_man_file Source code
create_model_man_file Source code
create_model_run_fn Source code
create_model_run_man_file Source code
distance_matrix Man page Source code
events Man page
events,SimInf_model-method Man page
events_SEIR Man page Source code
events_SIR Man page Source code
events_SISe Man page Source code
events_SISe3 Man page
extract_U Source code
have_openmp Man page Source code
infected Man page
infected,SEIR-method Man page
infected,SIR-method Man page
infected,SISe-method Man page
infected,SISe3-method Man page
infected,SISe3_sp-method Man page
infected,SISe_sp-method Man page
init Man page
init,SimInf_mparse-method Man page
is_wholenumber Man page Source code
mparse Man page Source code
nodes Man page
onUnload Source code
package_skeleton Man page
package_skeleton,SimInf_mparse-method Man page
pairs Man page
pairs,SimInf_model-method Man page
pairs-methods Man page
plot Man page Man page Man page Man page Man page Man page Man page Man page
plot,SEIR-method Man page
plot,SIR-method Man page
plot,SISe-method Man page
plot,SISe3-method Man page
plot,SISe3_sp-method Man page
plot,SISe_sp-method Man page
plot,SimInf_events-method Man page
plot,SimInf_model-method Man page
plot-methods Man page Man page Man page Man page Man page Man page Man page Man page
plot_SimInf_events Man page Source code
prevalence Man page
prevalence,SIR-method Man page
prevalence,SISe-method Man page
prevalence,SISe3-method Man page
prevalence,SISe3_sp-method Man page
prevalence,SISe_sp-method Man page
recovered Man page
recovered,SEIR-method Man page
recovered,SIR-method Man page
rewriteprop Source code
run Man page
run,SimInf_model-method Man page
run_outer Man page
run_outer,numeric,numeric,SimInf_model-method Man page
show,SimInf_events-method Man page
show,SimInf_events-methods Man page
show,SimInf_model-method Man page
show,SimInf_model-methods Man page
show_U Source code
show_V Source code
summary,SimInf_events-method Man page
summary,SimInf_events-methods Man page
summary,SimInf_model-method Man page
summary,SimInf_model-methods Man page
susceptible Man page
susceptible,SEIR-method Man page
susceptible,SIR-method Man page
susceptible,SISe-method Man page
susceptible,SISe3-method Man page
susceptible,SISe3_sp-method Man page
susceptible,SISe_sp-method Man page
tokens Source code
u0_SEIR Man page Source code
u0_SIR Man page Source code
u0_SISe Man page Source code
u0_SISe3 Man page
SimInf documentation built on Nov. 17, 2017, 5:29 a.m.