SpadeR: Species-Richness Prediction and Diversity Estimation with R

Estimation of various biodiversity indices and related (dis)similarity measures based on individual-based (abundance) data or sampling-unit-based (incidence) data taken from one or multiple communities/assemblages.

Install the latest version of this package by entering the following in R:
install.packages("SpadeR")
AuthorAnne Chao, K. H. Ma, T. C. Hsieh and Chun-Huo Chiu
Date of publication2016-09-06 14:53:57
MaintainerAnne Chao <chao@stat.nthu.edu.tw>
LicenseGPL (>= 3)
Version0.1.1

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Files

NAMESPACE
data
data/GeneticsDataAbu.rda
data/SimilarityPairData.rda
data/ChaoSpeciesData.rda
data/DiversityData.rda
data/SimilarityMultData.rda
data/ChaoSharedData.rda
R
R/SpecInciHomo.R R/HomoFun.R R/SpecInciChao2.R R/Chao1_sharedFun.R R/SpecAbunAce.R R/VarEstFun.R R/DataTransform.R R/basicInci.R R/SpecInciModelth.R R/SpecInciOut.R R/ChaoShared.Ind.R R/print.ChaoShared.R R/diff_Pan.R R/SpecAbunAce1.R R/SpecAbunHomo.R R/logCI.R R/ExtenProbFunMa.R R/diff_Chao1.R R/Chao1_bcEstFun.R R/HeteroFun.R R/SpeciesAbundance.R R/spader.R R/SpecInciiChao2.R R/SpecAbunJack1.R R/ChaoShared.Sam.R R/Chao1_sharedEstFun.R R/RareSpeciesGroupInprove.R R/Chao1_bcFun.R R/diff_Chao2bc.R R/SpecAbunChao1.R R/PanbcEstFun.R R/HomoEstFun.R R/SpecInciModelh.R R/Genetic_subroutine.R R/print.ChaoSpecies.R R/SpecAbunHomoMle.R R/BasicFun.R R/PanEstFun.Sam.R R/SpecInciJack2.R R/SpecAbuniChao1.R R/Diversity_subroutine.R R/Multiple_Community_Measure_subroutine.R R/Q.R R/SpecInciModelth1.R R/PanbcFun.R R/PanbcFun.Sam.R R/basicAbun.R R/diff_Chao1bc.R R/PanFun.Sam.R R/f.R R/InfreqSpeciesGroupInprove.R R/Chao2_bcEstFun.R R/HeteroEstFun.R R/PanFun.R R/Chao2_sharedFun.R R/SpecAbunJack2.R R/PanEstFun.R R/diff_Chao2.R R/Chao2_sharedEstFun.R R/Chao2_bcFun.R R/Two_Community_similarity_subroutine.R R/SpecInciChao2bc.R R/VarEstFun.Sam.R R/SpecAbunChao1bc.R R/RareSpeciesGroup.R R/SpecAbunOut.R R/SpecInciJack1.R R/SpecInciModelh1.R R/Cf0Fun.R R/SpeciesIncidence.R R/BootstrapFunMa.R R/SortDataFun.R R/diff_Panbc.R R/PanbcEstFun.Sam.R
MD5
DESCRIPTION
man
man/TwoComSimDemoData.Rd man/MulComSimDemoData.Rd man/SpecDemoData.Rd man/SharedSpecDemoData.Rd man/Diversity.Rd man/ChaoShared.Rd man/Genetics.Rd man/ChaoSpecies.Rd man/SimilarityMult.Rd man/spader-package.Rd man/GeneticsDataAbu.Rd man/SimilarityPair.Rd man/DivDemoData.Rd
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