API for SpadeR
Species-Richness Prediction and Diversity Estimation with R

Global functions
BC.Est Source code
BC_equ Source code
BasicFun Source code
Boots.pop Source code
Boots.pop_inc Source code
Bootstrap.CI Source code
BootstrapFunMa Source code
Bt_prob Source code
Bt_prob_abu Source code
Bt_prob_inc Source code
C0n_equ Source code
C1n_equ Source code
C2N_ee_equ_inc Source code
C2N_ee_se_inc Source code
C2n_equ Source code
C33_equ Source code
C33_se_equ Source code
CV.Ind Source code
Cf0Fun Source code
Chao1 Source code
Chao1_bc Source code
Chao1_bcEstFun Source code
Chao1_bcFun Source code
Chao1_bc_equ Source code
Chao1_equ Source code
Chao1_sharedEstFun Source code
Chao1_sharedFun Source code
Chao2_bcEstFun Source code
Chao2_bcFun Source code
Chao2_sharedEstFun Source code
Chao2_sharedFun Source code
ChaoHill Source code
ChaoShared Man page Source code
ChaoShared.Ind Source code
ChaoShared.Sam Source code
ChaoSharedData Man page
ChaoSpecies Man page Source code
ChaoSpeciesData Man page
Chao_Hill Source code
Chao_Hill_abu Source code
Chao_Hill_inc Source code
Chat.Ind Source code Source code
Chat.Ind_Inc Source code
Chat.Sam Source code
Cq2_est_equ Source code
Cqn_se_equ Source code
DataTransform Source code
Diversity Man page Source code
DiversityData Man page
Diversity_Inc Source code
Equal_weight_Horn_Esti_equ Source code
EstiBootComm.Ind Source code
EstiBootComm.Sam Source code
ExtenProbFunMa Source code
GST_equ Source code
GST_se_equ Source code
Genetics Man page Source code
GeneticsDataAbu Man page
HeteroEstFun Source code
HeteroFun Source code
Hill Source code
HomoEstFun Source code
HomoFun Source code
Horn.Est Source code
Horn_MLE_Multi Source code
Horn_MLE_Multi_equ Source code
Horn_MLE_equ Source code
Horn_Multi_equ Source code
InfreqSpeciesGroup Source code
Jaccard_Sorensen_Abundance_equ Source code
KH_Bray_curtis_equ Source code
KH_Braycurtis_equ Source code
MLE_Braycurtis_equ Source code
Multi_Esti_GammaEntropy Source code
PanEstFun Source code
PanEstFun.Sam Source code
PanFun Source code
PanFun.Sam Source code
PanbcEstFun Source code
PanbcEstFun.Sam Source code
PanbcFun Source code
PanbcFun.Sam Source code
Q Source code
RareSpeciesGroup Source code Source code
Shannon_Inci_index Source code
Shannon_index Source code
SimilarityMul Source code
SimilarityMult Man page Source code
SimilarityMultData Man page
SimilarityPair Man page Source code
SimilarityPairData Man page
SimilarityTwo Source code
Simpson_Inci_index Source code
Simpson_index Source code
SortDataFun Source code
SpadeR Man page
SpadeR-package Man page
SpecAbunAce Source code
SpecAbunAce1 Source code
SpecAbunAce1_equ Source code
SpecAbunAce_equ Source code
SpecAbunChao1 Source code
SpecAbunChao1bc Source code
SpecAbunHomo Source code
SpecAbunHomoMle Source code
SpecAbunJack1 Source code
SpecAbunJack2 Source code
SpecAbunOut Source code
SpecAbuniChao1 Source code
SpecInci Source code
SpecInciChao2 Source code Source code
SpecInciChao2bc Source code Source code
SpecInciHomo Source code
SpecInciJack1 Source code
SpecInciJack2 Source code
SpecInciModelh Source code Source code
SpecInciModelh1 Source code Source code
SpecInciModelth Source code
SpecInciModelth1 Source code
SpecInciOut Source code
SpecInciOut_raw Source code
SpecInciiChao2 Source code
SpeciesAbundance Source code
SpeciesIncidence Source code
Subentropy_MEE_equ Source code
Two_BC_equ Source code
Two_Horn_equ Source code
Two_com_correct_obspi Source code Source code
Two_com_correct_obspi_Inc Source code
Two_horn_MLE_equ Source code
U2_equ Source code
U2_equ_Inc Source code
VarEstFun Source code
VarEstFun.Sam Source code
basicAbun Source code
basicInci Source code
conf.reg Source code Source code
correct_obspi Source code Source code
correct_obspi_Inc Source code
diff_Chao1 Source code
diff_Chao1bc Source code
diff_Chao2 Source code
diff_Chao2bc Source code
diff_Pan Source code
diff_Panbc Source code
entropy_HT_Inci_equ Source code
entropy_HT_equ Source code
entropy_J1_equ Source code
entropy_MEE_Inci_equ Source code
entropy_MEE_equ Source code Source code Source code
entropy_MLE_Inci_equ Source code
entropy_MLE_bc_Inci_equ Source code
entropy_MLE_bc_equ Source code
entropy_MLE_equ Source code
f Source code
logCI Source code
p1bar_equ Source code
p1bar_equ_Inc Source code
print.ChaoShared Source code
print.ChaoSpecies Source code
print.spadeDiv Source code
print.spadeDiv_Inc Source code
print.spadeGenetic Source code
print.spadeMult Source code
print.spadeTwo Source code
reshapeChaoHill Source code
simpson_Inci_MLE_equ Source code
simpson_Inci_MVUE_equ Source code
simpson_MLE_equ Source code
simpson_MVUE_equ Source code
SpadeR documentation built on May 30, 2017, 8:12 a.m.