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Sysrecon: Systematical Metabolic Reconstruction
In the past decade, genome-scale metabolic reconstructions have widely been used to comprehend the systems biology of metabolic pathways within an organism. Different GSMs are constructed using various techniques that require distinct steps, but the input data, information conversion and software tools are neither concisely defined nor mathematically or programmatically formulated in a context-specific manner.The tool that quantitatively and qualitatively specifies each reconstruction steps and can generate a template list of reconstruction steps dynamically selected from a reconstruction step reservoir, constructed based on all available published papers.
Getting started
Browse package contents
Package details |
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| Author | Shilin Ouyang [aut, cre], Zihao Li [aut], Jiamin Hu [aut], Miyuan Cao [aut], Feng Yu [aut], Longfei Mao [aut], RStudio [cph, fnd] |
| Maintainer | Shilin Ouyang <ouyangshilin@hnu.edu.cn> |
| License | GPL-3 |
| Version | 0.1.3 |
| URL | https://oyshilin.github.io/sysrecon/ |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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