l_prior: l_prior

In TDCor: Gene Network Inference from Time-Series Transcriptomic Data

Description

Vector containing the prior associated with the genes included in the network reconstruction in Lavenus et al. 2015, Plant Cell.

By defining the l_prior vector, the user defines which genes should be regarded as positive regulators, which others as negative regulators and which can only be targets. The prior code is defined as follow: -1 for negative regulator; 0 for non-regulator (target only); 1 for positive regulator; 2 for both positive and negative regulator. The i-th element of the vector is the prior to associate to the i-th gene in l_genes.

Usage

data("l_prior")

Examples

# Load the vector
data(l_prior)

# Have a look at it
l_prior

TDCor documentation built on May 2, 2019, 3:41 p.m.