calculateEvalue: calculates E-value

In TFactSR: Enrichment Approach to Predict Which Transcription Factors are Regulated

calculates E-value

Description

This function calculates E-value based on .

Usage

calculateEvalue(df, TFs)

Arguments

df	a data frame containng p-values
TFs	a character vector of transcription factor

Value

data.frame

Author(s)

Atsushi Fukushima

References

Essaghir A et al. Nucleic Acids Res. 2010 Jun;38(11):e120.

Examples

data(DEGs)
data(catalog)

tftg <- extractTFTG(DEGs, catalog)
TFs <- tftg$TFs

p.value <- runif(10)/(1:10)
df <- data.frame(p.value = p.value)
res <- calculateEvalue(df, TFs)

TFactSR documentation built on Aug. 31, 2023, 5:09 p.m.