Files in TKF

Pairwise Distance Estimation with TKF91 and TKF92 Model

MD5

DESCRIPTION

NAMESPACE

inst/TestData/pair2.fasta

inst/TestData/pair1.fasta

inst/TestData/testSeqs.fasta

inst/makePackage/TKF.txt

inst/unitTests/test_TKF92.R inst/unitTests/test_TKF92HG.R inst/unitTests/test_TKF91.R inst/oldScripts/TKF.r

inst/oldScripts/dynprog_TKF91.c

inst/oldScripts/dynprog_TKF92.c

inst/buildMatrix/buildGonnet.R

inst/extdata/pair1.fasta

inst/extdata/testSet.fasta

inst/extdata/testSeqs.fasta

inst/extdata/pair.fasta

inst/extdata/daymatrix.txt

R/MinSqTree.R R/ScoringMatrix.R R/TKF92.R R/TKF91.R R/TKF92HG.R

src/matrix.c

src/R_init_TKF.c

src/MathFunctions.h

src/matrix.h

src/Makevars.win

src/TKF92HG.c

src/TKF91.h

src/TKF92.c

src/TKF91.c

src/TKF92.h

src/MathFunctions.c

src/Makevars

src/TKF92HG.h

man/GONNET.Rd man/optim.phylo.wls.Rd man/TKF92HG.Rd man/AAToInt.Rd man/PAMn.Rd man/TKF92.Rd man/TKF91.Rd tests/runTests.R

data/GONNET.rda

data/GONNETBF.rda

TKF documentation built on May 2, 2019, 7:59 a.m.