Man pages for TMB
Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'
| as.list.sdreport | Convert estimates to original list format. |
| benchmark | Benchmark parallel templates |
| checkConsistency | Check consistency and Laplace accuracy |
| compile | Compile a C++ template to DLL suitable for MakeADFun. |
| config | Get or set internal configuration variables |
| confint.tmbprofile | Profile based confidence intervals. |
| dynlib | Add dynlib extension |
| FreeADFun | Free memory allocated on the C++ side by 'MakeADFun'. |
| gdbsource | Source R-script through gdb to get backtrace. |
| GK | Gauss Kronrod configuration |
| MakeADFun | Construct objective functions with derivatives based on a... |
| newton | Generalized newton optimizer. |
| newtonOption | Set newton options for a model object. |
| normalize | Normalize process likelihood using the Laplace approximation. |
| oneStepPredict | Calculate one-step-ahead (OSA) residuals for a latent... |
| openmp | Control number of OpenMP threads used by a TMB model. |
| plot.tmbprofile | Plot likelihood profile. |
| precompile | Precompile the TMB library in order to speed up compilation... |
| print.checkConsistency | Print output from 'checkConsistency' |
| print.sdreport | Print brief model summary |
| Rinterface | Create minimal R-code corresponding to a cpp template. |
| runExample | Run one of the test examples. |
| runSymbolicAnalysis | Run symbolic analysis on sparse Hessian |
| sdreport | General sdreport function. |
| SR | Sequential reduction configuration |
| summary.checkConsistency | Summarize output from 'checkConsistency' |
| summary.sdreport | summary tables of model parameters |
| template | Create cpp template to get started. |
| tmbprofile | Adaptive likelihood profiling. |
| tmbroot | Compute likelihood profile confidence intervals of a TMB... |
