as.list.sdreport: Convert estimates to original list format.

In TMB: Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'

Convert estimates to original list format.

Description

Get estimated parameters or standard errors in the same shape as the original parameter list.

Usage

## S3 method for class 'sdreport'
as.list(x, what = "", report = FALSE, ...)

Arguments

x	Output from sdreport.
what	Select what to convert (Estimate / Std. Error).
report	Get AD reported variables rather than model parameters ?
...	Passed to summary.sdreport.

Details

This function converts the selected column what of summary(x, select = c("fixed", "random"), ...) to the same format as the original parameter list (re-ordered as the template parameter order). The argument what is partially matched among the column names of the summary table. The actual match is added as an attribute to the output.

Value

List of same shape as original parameter list.

Examples

## Not run: 
example(sdreport)

## Estimates as a parameter list:
as.list(rep, "Est")

## Std Errors in the same list format:
as.list(rep, "Std")

## p-values in the same list format:
as.list(rep, "Pr", p.value=TRUE)

## AD reported variables as a list:
as.list(rep, "Estimate", report=TRUE)

## Bias corrected AD reported variables as a list:
as.list(rep, "Est. (bias.correct)", report=TRUE)

## End(Not run)

TMB documentation built on Nov. 27, 2023, 5:12 p.m.