deg_filter: Function to Filter Differentially Expressed Genes (DEGs)
In TransProR: Analysis and Visualization of Multi-Omics Data
deg_filter R Documentation
Function to Filter Differentially Expressed Genes (DEGs)
Description
This function filters out genes based on their expression change status.
It returns the names of genes which are not "stable".
Usage
deg_filter(df)
Arguments
df
A data frame containing gene expression data.
Value
A vector of gene names that are differentially expressed.
Examples
DEG_deseq2_file <- system.file("extdata", "DEG_deseq2.rds", package = "TransProR")
DEG_deseq2 <- readRDS(DEG_deseq2_file)
DEG_deseq2_test <- deg_filter(DEG_deseq2)
TransProR documentation built on April 4, 2025, 3:16 a.m.
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| deg_filter | R Documentation |
Function to Filter Differentially Expressed Genes (DEGs)
Description
This function filters out genes based on their expression change status. It returns the names of genes which are not "stable".
Usage
deg_filter(df)
Arguments
df |
A data frame containing gene expression data. |
Value
A vector of gene names that are differentially expressed.
Examples
DEG_deseq2_file <- system.file("extdata", "DEG_deseq2.rds", package = "TransProR")
DEG_deseq2 <- readRDS(DEG_deseq2_file)
DEG_deseq2_test <- deg_filter(DEG_deseq2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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