YuGene: A Simple Approach to Scale Gene Expression Data Derived from Different Platforms for Integrated Analyses
Version 1.1.5

Simple method for comparison of gene expression generated across different experiments, and on different platforms; that does not require global renormalization, and is not restricted to comparison of identical probes. YuGene works on a range of microarray dataset distributions, such as between manufacturers. The resulting output allows direct comparisons of gene expression between experiments and experimental platforms.

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AuthorKim-Anh Le Cao, Florian Rohart, Leo McHugh, Othmar Korn, Christine A. Wells
Date of publication2015-11-19 11:02:18
MaintainerFlorian Rohart <f.rohart@uq.edu.au>
LicenseGPL (>= 2)
Version1.1.5
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("YuGene")

Man pages

array: Combination of multiple array experiments
ascorbate: Ascorbate Experiment
pca.default: Principal Components Analysis from the mixOmics package
pca.YuGene: Principal component analysis for the 'YuGene' class.
YuGene: YuGene: A simple method for comparing gene expression across...
YuGene-package: Transforms expression datasets to cumulative proportion for...

Functions

YuGene Man page Source code
YuGene-package Man page
array Man page
ascorbate Man page
pca Man page Source code
pca.YuGene Man page Source code
pca.default Man page Source code
study_split Source code

Files

NAMESPACE
NEWS
data
data/array.rda
data/ascorbate.rda
data/datalist
R
R/study_split.R
R/pca.YuGene.R
R/YuGene.R
MD5
DESCRIPTION
man
man/YuGene-package.Rd
man/ascorbate.Rd
man/array.Rd
man/pca.YuGene.Rd
man/pca.default.Rd
man/YuGene.Rd
YuGene documentation built on May 19, 2017, 8:32 p.m.