array: Combination of multiple array experiments
In YuGene: A Simple Approach to Scale Gene Expression Data Derived from Different Platforms for Integrated Analyses
Description
Usage
Format
Source
References
Description
Combination of 5 experiments. The data has been YuGene transformed, mapped to Ensembl ID. 2000 genes have been randomly selected.
Usage
1
Format
A list containing the following components:
data.all Matrix of 82 samples and 2000 gene expression.
experiment.alla factor containing the name of the experiments.
platform.alla factor containing the platform of each sample.
type.alla factor containing the type of each sample.
Source
The data were downloaded from www.stemformatics.org.
References
Brennand KJ, Simone A, Jou J, Gelboin-Burkhart C et al. Modelling schizophrenia using human induced pluripotent stem cells. Nature 2011 May 12;473(7346):221-5. PMID: 21490598
Zaehres H, Kögler G, Arauzo-Bravo MJ, Bleidissel M et al. Induction of pluripotency in human cord blood unrestricted somatic stem cells. Exp Hematol 2010 Sep;38(9):809-18, 818.e1-2. PMID: 20541586
Jia F, Wilson KD, Sun N, Gupta DM et al. A nonviral minicircle vector for deriving human iPS cells. Nat Methods 2010 Mar;7(3):197-9. PMID: 20139967
Maherali N, Ahfeldt T, Rigamonti A, Utikal J et al. A high-efficiency system for the generation and study of human induced pluripotent stem cells. Cell Stem Cell 2008 Sep 11;3(3):340-5. PMID: 18786420
Nayler S, Gatei M, Kozlov S, Gatti R et al. Induced pluripotent stem cells from ataxia-telangiectasia recapitulate the cellular phenotype. Stem Cells Transl Med 2012 Jul;1(7):523-35. PMID: 23197857
YuGene documentation built on May 2, 2019, 2:46 p.m.
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Description Usage Format Source References
Description
Combination of 5 experiments. The data has been YuGene transformed, mapped to Ensembl ID. 2000 genes have been randomly selected.
Usage
1 |
Format
A list containing the following components:
data.allMatrix of 82 samples and 2000 gene expression.
experiment.alla factor containing the name of the experiments.
platform.alla factor containing the platform of each sample.
type.alla factor containing the type of each sample.
Source
The data were downloaded from www.stemformatics.org.
References
Brennand KJ, Simone A, Jou J, Gelboin-Burkhart C et al. Modelling schizophrenia using human induced pluripotent stem cells. Nature 2011 May 12;473(7346):221-5. PMID: 21490598
Zaehres H, Kögler G, Arauzo-Bravo MJ, Bleidissel M et al. Induction of pluripotency in human cord blood unrestricted somatic stem cells. Exp Hematol 2010 Sep;38(9):809-18, 818.e1-2. PMID: 20541586
Jia F, Wilson KD, Sun N, Gupta DM et al. A nonviral minicircle vector for deriving human iPS cells. Nat Methods 2010 Mar;7(3):197-9. PMID: 20139967
Maherali N, Ahfeldt T, Rigamonti A, Utikal J et al. A high-efficiency system for the generation and study of human induced pluripotent stem cells. Cell Stem Cell 2008 Sep 11;3(3):340-5. PMID: 18786420
Nayler S, Gatei M, Kozlov S, Gatti R et al. Induced pluripotent stem cells from ataxia-telangiectasia recapitulate the cellular phenotype. Stem Cells Transl Med 2012 Jul;1(7):523-35. PMID: 23197857
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