Description Usage Arguments Details Value Examples
View source: R/aba_demographics.R
This function allows you to automatically create a demographics table from a fitted aba model. The variables in the table will be inferred from the spec of the model (predictors, covariates, outcomes, etc.), although this can be customized.
1 2 3 4 5 6 7 8 9 |
object |
abaModel. The fitted aba model to create demographics table from. |
strata |
string (optional). How to stratify the demographics table. |
include_predictors |
boolean. Whether to include predictors in table. |
include_covariates |
boolean. Whether to include covariates in table. |
include_outcomes |
boolean. Whether to include outcomes in table. |
add_vars |
character vector (optional). Any additional variables to add to the demographics table. These variables should be present in the data from the aba model. |
data_filter |
logical expression (optional). If this is specified, the data from the aba model will be further filtered before the table is made. |
Note that support is weaker for longitudinal data right now.
a TableOne object (see tableone
package).
1 2 3 4 5 6 7 8 9 10 11 12 13 14 | model <- aba_model() %>%
set_data(adnimerge %>% dplyr::filter(VISCODE == 'bl')) %>%
set_groups(everyone()) %>%
set_outcomes(ConvertedToAlzheimers, CSF_ABETA_STATUS_bl) %>%
set_predictors(
PLASMA_PTAU181_bl, PLASMA_NFL_bl,
c(PLASMA_PTAU181_bl, PLASMA_NFL_bl)
) %>%
set_covariates(AGE, GENDER, EDUCATION) %>%
set_stats('glm') %>%
aba_fit()
my_table <- model %>% aba_demographics(strata = 'DX_bl')
print(my_table)
|
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