acmwrapall: acmwrapall (acm warp all)
In acm4r: Align-and-Count Method comparisons of RFLP data

Description Usage Arguments Value Author(s) References

This function takes only take two required parameters. This function calls the function call_erra, call_acm, call_bablbs, call_gd1, call_gd2, and clusters with their default arguments.

1	acmwrapall(replic, patient, work_dir = ".", dnum = 1, delete = FALSE)

`replic`	is the full name of the file containing the rflp result of replicate strains
`patient`	is the full name of the file containing the rflp result of strains in patients
`work_dir`	is where the datasets should be stored
`dnum`	is the file number
`delete`	logical value indicating if you want to delete any pre-existing files. Default is FALSE

none

XiaoFei Zhao xiaofei.zhao@mail.mcgill.ca

Salamon et al. (1998) Accommodating Error Analysis in Comparison and Clustering of Molecular Fingerprints. Emerging Infectious Diseases Vol. 4, No. 2, April-June 1998

acm4r documentation built on May 1, 2019, 7:50 p.m.