Description Usage Arguments Value Examples

This accessor is used to retrieve a matrix of allele data.
By default, a matrix of integers representing allele counts is returned.
If `freq`

is TRUE, then data are standardised as frequencies, so that for any individual and any locus the data sum to 1.
The argument `NA.method`

allows to replace missing data (NAs).
This accessor replaces the previous function `truenames`

as well as the function `makefreq`

.

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`x` |
a genind or genpop object. |

`...` |
further arguments passed to other methods. |

`freq` |
a logical indicating if data should be transformed into relative frequencies (TRUE); defaults to FALSE. |

`NA.method` |
a method to replace NA; asis: leave NAs as is; mean: replace by the mean allele frequencies; zero: replace by zero |

a matrix of integers or numeric

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adegenet documentation built on Feb. 3, 2018, 1:01 a.m.

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