API for apTreeshape
Analyses of Phylogenetic Treeshape
| Global functions | |
|---|---|
| Delta | Man page Source code |
| a_N | Man page Source code |
| aldous.test | Man page |
| all.equal.treeshape | Man page |
| ancestor | Man page Source code |
| as.phylo.treeshape | Man page |
| as.treeshape | Man page |
| as.treeshape.phylo | Man page |
| as.treeshape.treebalance | Man page |
| aux_lik | Man page Source code |
| bind.trees | Man page Source code |
| build_tree | Man page Source code |
| carnivora.treeshape | Man page |
| change_int | Man page Source code |
| change_int_eta | Man page Source code |
| cladesize | Man page |
| colless | Man page |
| colless.test | Man page |
| cutreeshape | Man page |
| cytochromc | Man page |
| depth | Man page Source code |
| enhance | Man page Source code |
| enhance_eta | Man page Source code |
| get_PD_sample | Man page Source code |
| get_extinction_list | Man page Source code |
| get_tree_beta | Man page Source code |
| hivtree.treeshape | Man page |
| insert | Man page Source code |
| is.binary.phylo | Man page |
| lambda.epsilon | Man page Source code |
| lambda_N | Man page Source code |
| likelihood.test | Man page |
| logratio | Man page Source code |
| maxlik.betasplit | Man page |
| mcmc_alpha | Man page Source code |
| mcmc_eta | Man page Source code |
| nodes_depths_ordonnes | Man page Source code |
| pandit | Man page |
| plot.treeshape | Man page |
| primates | Man page |
| raldous | Man page |
| rbactrian | Man page Source code |
| rbiased | Man page |
| rhodopsin | Man page |
| rpda | Man page |
| rtreeshape | Man page |
| ryule | Man page Source code |
| sackin | Man page |
| sackin.test | Man page |
| shape.statistic | Man page |
| shift.test | Man page Source code |
| simulate.R | Man page Source code |
| simulate.R.K | Man page Source code |
| simulate.Tau.X | Man page Source code |
| simulate.Yi | Man page Source code |
| simulate_kingman | Man page Source code |
| simulate_tree | Man page Source code |
| simulate_yule | Man page Source code |
| smaller.clade.spectrum | Man page |
| smaller.clade.spectrum2 | Man page Source code |
| spectrum.treeshape | Man page |
| split | Man page Source code |
| subtree.test | Man page |
| summary.treeshape | Man page |
| tipsubtree | Man page |
| transform | Man page Source code |
| transform_eta | Man page Source code |
| treebalance | Man page |
| treebase | Man page |
| treeshape | Man page |
| universal.treeshape | Man page |
| yule_lengths | Man page Source code |
