data.Italian.bladder.cancer: Italian bladder cancer data

Description Usage Value Author(s) Source References See Also Examples

View source: R/apc_data_sets.R

Description

Function that organises Italian bladder data in apc.data.list format.

The data set is taken from table IV of Clayton and Schifflers (1987a), which contains age-specific incidence rates (per 100,000 person-years observation) of bladder cancer in Italian males during the period 1955-1979. Numerators are also available. The original source was the WHO mortality database.

The data set is in "AP"-format.

Usage

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Value

The value is a list in apc.data.list format.

rates

matrix of mortality rates. This is not needed for the apc.data.list format, but included as this is the original data formats

response

matrix of cases

dose

matrix of cases/rates

data.format

logical equal to "AP". Data organised with age-groups in rows and period-groups in columns.

age1

numeric equal to 25. This is the label for the first age group covering ages 25-29.

per1

numeric equal to 1955. This is the label for the first period group covering period 1955-1959.

coh1

NULL. Not needed when data.format="AP"

unit

numeric equal to 5. This is the width of the age and period groups.

per.zero

NULL. Not needed when data.format="AP"

per.max

NULL. Not needed when data.format="AP"

time.adjust

0. Thus age=25 in period=1955 corresponds to cohort=1955-25+0=1930, and indeed the centers of the age and period groups, that is age=27 and period=1957 translate into cohort=1957-27+0=1930.

label

character. "Italian bladder cancer".

Author(s)

Bent Nielsen <bent.nielsen@nuffield.ox.ac.uk> 8 Sep 2015 (24 Oct 2013)

Source

Table IV of Clayton and Schifflers (1987a).

References

Clayton, D. and Schifflers, E. (1987a) Models for temperoral variation in cancer rates. I: age-period and age-cohort models. Statistics in Medicine 6, 449-467.

See Also

General description of apc.data.list format.

Examples

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#########################
##	It is convient to construct a data variable

data	<- data.Italian.bladder.cancer()

##	To see the content of the data

data

Example output

$response
      1955-1959 1960-1964 1965-1969 1970-1974 1975-1979
25-29         3         3         1         4        12
30-34        16        17        11         8         8
35-39        24        29        33        39        30
40-44        79        76        82        95       115
45-49       234       185       183       267       285
50-54       458       552       450       431       723
55-59       720       867      1069       974      1004
60-64       890      1230      1550      1840      1811
65-69       891      1266      1829      2395      3028
70-74       920      1243      1584      2292      3176
75-79       831       937      1285      1787      2659

$dose
      1955-1959 1960-1964 1965-1969 1970-1974 1975-1979
25-29 100.00000 100.00000 100.00000 100.00000 100.00000
30-34  94.11765  94.44444  91.66667 100.00000  88.88889
35-39  75.00000  93.54839  94.28571  92.85714  93.75000
40-44  75.96154  72.38095  90.10989  91.34615  90.55118
45-49  81.81818  73.41270  70.11494  87.82895  90.18987
50-54  68.97590  78.52063  69.98445  66.71827  85.36009
55-59  56.64831  64.74981  73.26936  66.53005  61.29426
60-64  44.25659  51.29274  58.07419  66.78766  63.47704
65-69  36.51639  38.17853  43.42355  50.13607  60.11515
70-74  28.04023  29.37840  29.96028  34.72201  42.55091
75-79  18.24769  19.54526  20.70911  21.11045  25.51579

$data.format
[1] "AP"

$age1
[1] 25

$per1
[1] 1955

$coh1
[1] 5

$unit
[1] 5

$per.zero
NULL

$per.max
NULL

$time.adjust
[1] 0

$label
[1] "Italian bladder cancer"

$n.decimal
NULL

apc documentation built on Oct. 23, 2020, 6:17 p.m.