GSprocessing | R Documentation |
bakRFnData
This function creates a fraction new estimate data frame that can be passed to
bakRFnData
, using main .tsv file output by GRAND-SLAM.
GSprocessing(GS, use_symbol = FALSE)
GS |
Table of read counts and NTR (fraction new) estimate parameters output by GRAND-SLAM. Corresponds to the run_name.tsv file included in GRAND-SLAM output |
use_symbol |
Logical; if TRUE, then Symbol column rather than Gene column is used as feature column (XF) in output data frame. |
A data frame that can be passed as the fns
parameter to bakRFnData
# Load GRAND-SLAM table
data("GS_table")
# Create bakRData object
fns <- GSprocessing(GS_table)
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