fns: Example fraction news (fns) data frame
In bakR: Analyze and Compare Nucleotide Recoding RNA Sequencing Datasets
fns R Documentation
Example fraction news (fns) data frame
Description
Subset of fraction new estimates for dataset published by Luo et al. (2020).
Fraction new estimates, uncertainties, and read counts are included for 300
genes to keep the file size small.
Usage
data(fns)
Format
A dataframe with 1,800 rows and 5 variables. Input to bakRFndata
- sample
Sample name
- XF
Name of feature (e.g., ENSEMBL gene ID)
- fn
Estimate of fraction of reads from feature that were new
- se
Uncertainty in fraction new estimate (optional in bakRFnData)
- n
Number of sequencing reads
References
Luo et al. (2020) Biochemistry. 59(42), 4121-4142
Examples
data(fns)
data(metadf)
bakRFndataobj <- bakRFnData(fns, metadf)
bakR documentation built on June 22, 2024, 6:55 p.m.
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| fns | R Documentation |
Example fraction news (fns) data frame
Description
Subset of fraction new estimates for dataset published by Luo et al. (2020). Fraction new estimates, uncertainties, and read counts are included for 300 genes to keep the file size small.
Usage
data(fns)
Format
A dataframe with 1,800 rows and 5 variables. Input to bakRFndata
- sample
Sample name
- XF
Name of feature (e.g., ENSEMBL gene ID)
- fn
Estimate of fraction of reads from feature that were new
- se
Uncertainty in fraction new estimate (optional in bakRFnData)
- n
Number of sequencing reads
References
Luo et al. (2020) Biochemistry. 59(42), 4121-4142
Examples
data(fns)
data(metadf)
bakRFndataobj <- bakRFnData(fns, metadf)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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