Nothing
#' Create a `beast2_options` structure for the `mcbette` R package
#'
#' Create a `beast2_options` structure to be used for the
#' `mcbette` R package, which is a package that allows one to do
#' model comparison.
#' The generated filenames indicating `mcbette` usage,
#' as well as the correct BEAST2 binary/executable type
#' @inheritParams default_params_doc
#' @return a `beast2_options` structure suitable to be used
#' by the `mcbette` R package,
#' which is a \link{list} of all function arguments,
#' of which all elements are checked (by \link{check_beast2_options})
#' @seealso to create a regular (that is, not intended
#' for model comparison) BEAST2 options structure,
#' use \link{create_beast2_options}
#' @examples
#' check_empty_beaustier_folders()
#'
#' create_mcbette_beast2_options()
#'
#' check_empty_beaustier_folders()
#' @author Richèl J.C. Bilderbeek
#' @export
create_mcbette_beast2_options <- function(
input_filename = create_temp_input_filename(),
output_state_filename = create_temp_state_filename(),
rng_seed = NA,
n_threads = NA,
use_beagle = FALSE,
overwrite = TRUE,
beast2_bin_path = get_default_beast2_bin_path(),
verbose = FALSE
) {
check_true(is_bin_path(beast2_bin_path))
create_beast2_options(
input_filename = input_filename,
output_state_filename = output_state_filename,
rng_seed = rng_seed,
n_threads = n_threads,
use_beagle = use_beagle,
overwrite = overwrite,
beast2_path = beast2_bin_path,
verbose = verbose
)
}
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.