get_dyna_residuals: Residuals of dynamic prediction

In biogrowth: Modelling of Population Growth

Residuals of dynamic prediction

Description

Function for calculating residuals of a dynamic prediction according to the requirements of modFit().

Usage

get_dyna_residuals(
  this_p,
  fit_data,
  env_conditions,
  known_pars,
  sec_model_names,
  cost = NULL,
  logbase_mu = logbase_logN,
  logbase_logN = 10
)

Arguments

this_p	named vector of model parameters
fit_data	tibble with the data for the fit
env_conditions	tibble with the environmental conditions
known_pars	named vector of known model parameters
sec_model_names	named character vector with names the environmental conditions and values the secondary model (e.g. 'CPM').
cost	an instance of modCost to be combined (to fit multiple models).
logbase_mu	Base of the logarithm of the growthrate. By default, the same as logbase_logN. See vignette about units for details.
logbase_logN	Base of the logarithm for the population size. By default, 10 (i.e. log10). See vignette about units for details.

Value

An instance of modCost().

biogrowth documentation built on Aug. 19, 2023, 1:06 a.m.