apply_thresholds | R Documentation |
apply_thresholds
thresholds an additional set of matrices (e.g.,
FA-weighted matrices for DTI tractography) based on the matrices that have
been returned from create_mats
. This ensures that the same
connections are present in both sets of matrices.
apply_thresholds(sub.mats, group.mats, W.files, inds)
sub.mats |
List (length equal to number of thresholds) of numeric arrays (3-dim) for all subjects |
group.mats |
List (length equal to number of thresholds) of numeric arrays (3-dim) for group-level data |
W.files |
Character vector of the filenames of the files with connectivity matrices |
inds |
List (length equal to number of groups) of integers; each list element should be a vector of length equal to the group sizes |
The argument W.files
accepts the same formats as A.files
; see
create_mats
for details.
List containing:
W |
A 3-d array of the raw connection matrices |
W.norm.sub |
List of 3-d arrays of the normalized connection matrices for all given thresholds |
W.norm.mean |
List of 3-d arrays of the normalized connection matrices averaged for each group |
Christopher G. Watson, cgwatson@bu.edu
## Not run:
W.mats <- apply_thresholds(A.norm.sub, A.norm.mean, f.W, inds)
## End(Not run)
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