choose.edges: Select edges for re-wiring

Description Usage Arguments Value Author(s)

View source: R/random_graphs.R

Description

choose.edges selects edges to be re-wired when simulating random graphs while controlling for clustering. It is based on the algorithm by Bansal et al. (2009), BMC Bioinformatics.

Usage

1
choose.edges(A, degs.large)

Arguments

A

Numeric (adjacency) matrix

degs.large

Integer vector of vertex numbers with degree greater than one

Value

A data frame with four elements; two edges (y1, z1) and (y2, z2) will be removed, and two edges (y1, y2) and (z1, z2) will be added between the four vertices.

Author(s)

Christopher G. Watson, cgwatson@bu.edu


brainGraph documentation built on Oct. 23, 2020, 6:37 p.m.