Files in carbondate
Calibration and Summarisation of Radiocarbon Dates

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
R/FindPredictiveCalendarAgeDensity.R R/carbondate-package.R R/FindSummedProbabilityDistribution.R R/DPMM_helpers.R R/RJ_helpers.R R/FindPosteriorMeanRate.R R/PlotConvergenceData.R R/UpdateCalendarAgesGibbs.R R/InterpolateCalibrationCurve.R R/data.R R/plot_helpers.R R/WalkerBivarDirichlet.R R/PlotNumberOfInternalChanges.R R/UpdatePoissonProcessRateRevJump.R R/GenerateOxcalCode.R R/PlotPosteriorMeanRate.R R/PPcalibrate.R R/PlotCalendarAgeDensityIndividualSample.R R/PlotPosteriorChangePoints.R R/cpp11.R R/PolyaUrnBivarDirichlet.R R/PlotNumberOfClusters.R R/radiocarbon_scales.R R/PlotPredictiveCalendarAgeDensity.R R/PlotPosteriorHeights.R R/check_arguments.R R/PlotGelmanRubin.R R/CalibrateSingleDetermination.R R/PlotRateIndividualRealisation.R
src/sample.cpp
src/polya_urn_update_step.cpp
src/update_calendar_ages.cpp
src/find_hpd.cpp
src/local_rng.h
src/walker_update_step.cpp
src/update_calendar_ages_rjpp.cpp
src/update_helpers.cpp
src/find_predictive_density.cpp
src/walker_update_helpers.cpp
src/polya_urn_update_helpers.cpp
src/cpp11.cpp
inst/CITATION
inst/doc/Non-parametric-summed-density.R inst/doc/carbondate.Rmd inst/doc/determining-convergence.R inst/doc/Poisson-process-modelling.R inst/doc/Against_SPDs.R
inst/doc/determining-convergence.html
inst/doc/Against_SPDs.Rmd inst/doc/Independent_calibration.R
inst/doc/Non-parametric-summed-density.html
inst/doc/Poisson-process-modelling.html
inst/doc/Non-parametric-summed-density.Rmd
inst/doc/Against_SPDs.html
inst/doc/Independent_calibration.Rmd inst/doc/carbondate.R inst/doc/determining-convergence.Rmd
inst/doc/carbondate.html
inst/doc/Poisson-process-modelling.Rmd
inst/doc/Independent_calibration.html
build/vignette.rds
tests/testthat.R tests/testthat/test-InterpolateCalibrationCurve.R tests/testthat/test-FindSummedProbabilityDistribution.R tests/testthat/test-CalibrateSingleDetermination.R tests/testthat/test-FindCalPrior.R tests/testthat/test-PPcalibrate.R tests/testthat/test-UpdatePoissonProcessRateRevJump.R tests/testthat/test-CalendarAgeLikelihoodGivenCurve.R tests/testthat/test-WalkerBivarDirichlet.R tests/testthat/Rplots.pdf tests/testthat/test-ChangePos.R tests/testthat/test-check_arguments.R tests/testthat/test-PolyaUrnBivarDirichlet.R tests/testthat/test-Birth.R tests/testthat/test-Death.R tests/testthat/test-FindMoveProbability.R tests/testthat/test-ChangeHeight.R tests/testthat/fixtures/make-polya-urn-output.R tests/testthat/fixtures/LegacyChangePos.R tests/testthat/fixtures/LegacyHelpers.R
tests/testthat/fixtures/polya_urn_output.rda
tests/testthat/fixtures/LegacyFindCalPrior.R
tests/testthat/fixtures/walker_input.rda
tests/testthat/fixtures/LegacyFindMoveProb.R tests/testthat/fixtures/make-walker-output.R tests/testthat/fixtures/LegacyBirth.R tests/testthat/fixtures/LegacySingleRJUpdate.R tests/testthat/fixtures/LegacyChangeHeight.R
tests/testthat/fixtures/polya_urn_input.rda
tests/testthat/fixtures/LegacyCalibrate.R
tests/testthat/fixtures/walker_output.rda
tests/testthat/fixtures/LegacyDeath.R tests/testthat/fixtures/helpers/WalkerPostProcessingFinal.R tests/testthat/fixtures/helpers/NealDirichletMixtureMasterFunctionsFinal.R tests/testthat/fixtures/helpers/SimStudyFuncsFinal.R tests/testthat/fixtures/helpers/NealPostProcessingFinal.R
tests/testthat/fixtures/helpers/kerr2014sss_sup.csv
tests/testthat/fixtures/helpers/WalkerDirichletMixtureUpdateFunsFinal.R
tests/testthat/fixtures/helpers/intcal20.14c
tests/testthat/fixtures/helpers/SliceUpdateFunsFinal.R tests/testthat/fixtures/helpers/WalkerMasterFunctionFinal.R vignettes/carbondate.Rmd vignettes/Against_SPDs.Rmd
vignettes/references.bib
vignettes/Non-parametric-summed-density.Rmd vignettes/Independent_calibration.Rmd vignettes/determining-convergence.Rmd vignettes/Poisson-process-modelling.Rmd
vignettes/Non-parametric-summed-density-short.Rmd-in-progress
vignettes/figures-convergence/calculate_polya_kerr-1.png
vignettes/figures-convergence/calculate_kld-1.png
vignettes/figures-convergence/calculate_gr_multiple-1.png
vignettes/figures-convergence/calculate_polya_normals-1.png
vignettes/figures-convergence/calculate_gr-1.png
data/cervus.rda
data/bison.rda
data/kerr.rda
data/human.rda
data/equus.rda
data/intcal09.rda
data/alces.rda
data/two_normals.rda
data/intcal13.rda
data/shcal13.rda
data/armit.rda
data/intcal98.rda
data/intcal04.rda
data/buchanan.rda
data/intcal20.rda
data/mammuthus.rda
data/pp_uniform_phase.rda
data/shcal20.rda
data/shcal04.rda
man/buchanan.Rd man/WalkerBivarDirichlet.Rd man/shcal13.Rd man/intcal09.Rd man/human.Rd man/PlotGelmanRubinDiagnosticSingleChain.Rd man/FindPosteriorMeanRate.Rd man/PlotCalendarAgeDensityIndividualSample.Rd man/intcal20.Rd man/armit.Rd man/intcal13.Rd man/alces.Rd man/equus.Rd man/kerr.Rd man/intcal04.Rd man/PlotNumberOfClusters.Rd man/CalibrateSingleDetermination.Rd man/InterpolateCalibrationCurve.Rd man/pp_uniform_phase.Rd man/PlotPosteriorChangePoints.Rd man/bison.Rd man/mammuthus.Rd man/PlotPosteriorMeanRate.Rd man/FindSummedProbabilityDistribution.Rd man/shcal04.Rd man/PlotRateIndividualRealisation.Rd man/PPcalibrate.Rd man/PolyaUrnBivarDirichlet.Rd man/cervus.Rd man/PlotPredictiveCalendarAgeDensity.Rd man/PlotGelmanRubinDiagnosticMultiChain.Rd man/two_normals.Rd man/intcal98.Rd man/PlotPosteriorHeights.Rd man/PlotNumberOfInternalChanges.Rd man/FindPredictiveCalendarAgeDensity.Rd man/GenerateOxcalCode.Rd man/shcal20.Rd man/PlotConvergenceData.Rd
man/figures/README-plot_mean_rate-1.png
man/figures/README-calendar_age-1.png
man/figures/README-plot_density-1.png
carbondate documentation built on April 11, 2025, 6:18 p.m.