Community Assembly by Traits: Individuals and Beyond

AbToInd | Internal function. Transform abundance data matrix into... |

as.listofindex | Transform index results in a list of index |

Auxiliary.functions | Auxiliary functions |

cati-package | Community Assembly by Traits: Individuals and Beyond |

ComIndex | Computing metrics to test and quantify the non-random... |

ComIndexMulti | Computing multitraits metrics to test and quantify the... |

CVNND | Coefficient of variation, mean, minimum and standard... |

decompCTRE | Variance partitioning for multiple traits |

finch.ind | Finch morphological data |

Fred | Functional richness, evenness and divergence following... |

IndexByGroups | Apply metrics to groups. |

MinMaxMST | Ratio of the shortest distance to the longest distance in a... |

partvar | Variance partitioning accross nested scales |

plotCorTstats | Plot the bivariate relationships between T-statistics |

plotDistri | Plot function to represent density of trait values |

plot.listofindex | Plot community assembly index |

plotRandtest | Plot result of observed indices values against null... |

plotSESvar | Plot SES values against a variable |

plotSpPop | Plot populations values against species values |

plotSpVar | Plot populations values against species values |

Pval | Calcul of p-value for object of class Tstats, ComIndex,... |

RandCom | Toy model to simulate internal and/or external filtering |

RaoRel | Alpha, gamma and beta-components for taxonomic, functional... |

samplingSubsetData | Sampling subset of data. |

ses | Standardized effect size and confidence interval for a matrix... |

ses.listofindex | Standardized effect size for a list of index. |

SumBL | Sum of branch length of a classification dendrogram (Petchey... |

traitflex.anova | Variance decomposition for a given trait used in decompCTRE |

Tstats | Computing observed T-statistics (T for Traits) and null... |

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