cg: Compare Groups, Analytically and Graphically

Comprehensive data analysis software, and the name "cg" stands for "compare groups." Its genesis and evolution are driven by common needs to compare administrations, conditions, etc. in medicine research and development. The current version provides comparisons of unpaired samples, i.e. a linear model with one factor of at least two levels. It also provides comparisons of two paired samples. Good data graphs, modern statistical methods, and useful displays of results are emphasized.

AuthorBill Pikounis [aut, cre, cph], John Oleynick [aut], Eva Ye [ctb]
Date of publication2016-01-04 23:10:36
MaintainerBill Pikounis <cg@billpikounis.net>
LicenseGPL-2 | GPL-3
Version1.0-3

View on CRAN

Man pages

anorexiaFT: AnorexiaFT Data Set in the cg package

boxplot.cgOneFactorData: Box Plot Graph of Groups from a cgOneFactorData object

canine: Canine Data Set in the cg package

canine.listfmt: Canine Data Set in the cg package

cgInternalClasses: cg package Internal Virtual Classes

cgInternalUtilities: cg package Internal Utilities

cgLineColors: Color Choice order for Graph Lines

cg-package: Compare Groups, Analytically and Graphically

cgValidity: cg package Validity Checks

comparisons: Create a table of comparisons amongst groups

comparisonsgraph: Create an graph of comparisons

comparisonsGraph.cgOneFactorComparisonsTable: Create an graph of the comparisons in a...

comparisonsGraph.cgPairedDifferenceComparisonsTable: Create an graph of the comparisons in a...

comparisonsGraphGeneric: Graph comparisons specified amongst groups

comparisonsTable: Create a Table of Comparisons amongst Groups

comparisonsTable.cgOneFactorFit: Create a table of comparisons amongst groups with the...

comparisonsTable.cgPairedDifferenceFit: Create a table of comparisons between two groups with the...

correlationTable: Compute Correlations

correlationTable.cgPairedDifferenceData: Compute Correlations from a cgPairedDifferenceData object

descriptiveTable: Compute Descriptive Summary Statistics of Groups

descriptiveTable.cgOneFactorData: Compute Descriptive Summary Statistics of Groups in a...

descriptiveTable.cgPairedDifferenceData: Compute Descriptive Summary Statistics of Groups in a...

diffGraph: Graph Paired Differences

diffGraph.cgPairedDifferenceData: Graph Paired Differences from a cgPairedDifferenceData object

downweightedTable: Create a table of downweighted observations from a Resistant...

downweightedTable.cgOneFactorFit: Create a table of downweighted observations from a Resistant...

downweightedTable.cgPairedDifferenceFit: Create a table of downweighted observations from a Resistant...

errorbargraph: Create an error bar graph based on pairwise multiple...

errorBarGraph.cgOneFactorFit: Create an Error Bar graph amongst groups in a cgOneFactorFit...

errorBarGraphGeneric: Create an Error Bar graph amongst groups

fit: Fit models to data

fit.cgOneFactorData: Fit models to a cgOneFactorData object

fit.cgPairedDifferenceData: Fit models to a cgPairedDifferenceData object

globalTest: Perform a global test of significance

globalTest.cgOneFactorFit: Perform a global Test of significance with cgOneFactorFit...

gmcsfcens: GM-CSF censored data set in the cg package

gmcsfcens.listfmt: GM-CSF censored data set in the cg package

grpSummaryTable: Create a table of estimated group means and variability

grpSummaryTable.cgOneFactorFit: Create a table of estimated group means and variability with...

kmGraph: Graph Distribution Functions of Groups

kmGraph.cgOneFactorData: Graph Distribution Functions of Groups in a cgOneFactorData...

pointGraph: Graph Individual Data Points of Groups

pointGraph.cgOneFactorData: Graph Individual Data Points in a cgOneFactorData object

prepare: Prepare a cg data object from a data frame

prepareCGOneFactorData: Prepare data object from a data frame for One Factor /...

prepareCGPairedDifferenceData: Prepare data object from a data frame for Paired Samples...

print.cgOneFactorComparisonsTable: Print One Factor Comparisons Table object with some format...

print.cgOneFactorDescriptiveTable: Print a One Factor Descriptive Table object with some format...

print.cgOneFactorDownweightedTable: Print Downweighted Observations Table object with some format...

print.cgOneFactorFit: Print One Factor Model Fit object with some format options

print.cgOneFactorGlobalTest: Print One Factor Global F-test object with some format...

print.cgOneFactorGrpSummaryTable: Print One Factor Group Summary Table object with some format...

print.cgOneFactorSampleSizeTable: Print a One Factor Sample Size Table object with some format...

print.cgPairedDifferenceComparisonsTable: Print Paired Difference Comparisons Table object with some...

print.cgPairedDifferenceCorrelationTable: Print a Paired Difference Correlation Table object with some...

print.cgPairedDifferenceDescriptiveTable: Print a Paired Difference Descriptive Table object with some...

print.cgPairedDifferenceDownweightedTable: Print Downweighted Observations Table object with some format...

print.cgPairedDifferenceFit: Print One Factor Model Fit object with some format options

print.cgPairedDifferenceSampleSizeTable: Print a Paired Difference Sample Size Table object with some...

print.cgPairedDifferenceVarianceTable: Print a Paired Difference Variance Table object with some...

profileGraph: Graph Profiles of Experimental Units

profileGraph.cgPairedDifferenceData: Graph Profiles of Experimental Unit Pairs in a...

qqGraph: Quantile-Quantile Graphs

qqGraph.cgOneFactorFit: Quantile-Quantile (QQ) Graphs of a cgOneFactorFit object

qqGraph.cgPairedDifferenceFit: Quantile-Quantile (QQ) Graphs of a cgPairedDifferenceFit...

samplesizeGraph: Graph Estimated Sample Sizes

samplesizeGraph.cgOneFactorSampleSizeTable: Graph estimated sample sizes from a...

samplesizeGraph.cgPairedDifferenceSampleSizeTable: Graph estimated sample sizes from a...

samplesizeTable: Estimate Required Sample Sizes

samplesizeTable.cgOneFactorFit: Estimate Sample Sizes based on a cgOneFactorFit object

samplesizeTable.cgPairedDifferenceFit: Estimate Sample Sizes based on a cgPairedDifferenceFit object

show.cgOneFactorComparisonsTable: Show a One Factor Comparisons Table object from the cg...

show.cgOneFactorDescriptiveTable: Show a One Factor Descriptive Table object from the cg...

show.cgOneFactorDownweightedTable: Show a One Factor Downweighted Table object from the cg...

show.cgOneFactorGlobalTest: Show a Global Test object from the cg package

show.cgOneFactorGrpSummaryTable: Show a One Factor Group Summary Table object from the cg...

show.cgOneFactorSampleSizeTable: Show a One Factor Sample Size Table object from the cg...

show.cgPairedDifferenceComparisonsTable: Show a Paired Difference Data Comparisons Table object from...

show.cgPairedDifferenceCorrelationTable: Show a Paired Difference Correlation Table object from the cg...

show.cgPairedDifferenceDescriptiveTable: Show a Paired Difference Descriptive Table object from the cg...

show.cgPairedDifferenceDownweightedTable: Show a Paired Difference Downweighted Table object from the...

show.cgPairedDifferenceSampleSizeTable: Show a Paired Difference Sample Size Table object from the cg...

show.cgPairedDifferenceVarianceTable: Show a Paired Difference Variance Table object from the cg...

showObj: Show raw form of an object from the cg package

showObj.cgOneFactorFit: Show a Fitted Model object from the cg package

showObj.cgPairedDifferenceFit: Show a Fitted Model object from the cg package

summary.cgOneFactorFit: Summary display of a One Factor Model Fit object with some...

summary.cgPairedDifferenceFit: Summary display of a Paired Difference Model Fit object with...

varianceGraph: Variance Graphs

varianceGraph.cgOneFactorFit: Equal Variance Graphs assessment of cgOneFactorFit object

varianceTable: Compute Variance Components

varianceTable.cgPairedDifferenceFit: Compute Variances from a cgPairedDifferenceFit object

Files in this package

cg
cg/inst
cg/inst/CITATION
cg/inst/NEWS
cg/NAMESPACE
cg/data
cg/data/gmcsfcens.tab.gz
cg/data/gmcsfcens.listfmt3.rda
cg/data/gmcsfcens.listfmt3.tab.gz
cg/data/gmcsfcens.listfmt1.rda
cg/data/anorexiaFT.tab.gz
cg/data/gmcsfcens.listfmt2.rda
cg/data/canine.tab.gz
cg/data/gmcsfcens.listfmt2.tab.gz
cg/data/gmcsfcens.listfmt1.tab.gz
cg/data/canine.listfmt.tab.gz
cg/data/canine.listfmt.rda
cg/data/anorexiaFT.rda
cg/data/gmcsfcens.rda
cg/data/canine.rda
cg/R
cg/R/p03FormalOneFactorData.R cg/R/version.R cg/R/p14DiagnosticsPairedDifferenceData.R cg/R/p12DescriptivePairedDifferenceData.R cg/R/p00ReadInOneFactorData.R cg/R/p05SampleSizeOneFactorData.R cg/R/generics.R cg/R/utilities.R cg/R/p01FitOneFactorData.R cg/R/valid.R cg/R/00virtual.R cg/R/p10ReadInPairedDifferenceData.R cg/R/p02DescriptiveOneFactorData.R cg/R/p15SampleSizePairedDifferenceData.R cg/R/p11FitPairedDifferenceData.R cg/R/p04DiagnosticsOneFactorData.R cg/R/p13FormalPairedDifferenceData.R
cg/MD5
cg/DESCRIPTION
cg/man
cg/man/print.cgPairedDifferenceDownweightedTable.Rd cg/man/diffGraph.Rd cg/man/correlationTable.cgPairedDifferenceData.Rd cg/man/cgValidity.Rd cg/man/cgInternalUtilities.Rd cg/man/fit.Rd cg/man/print.cgPairedDifferenceComparisonsTable.Rd cg/man/prepareCGPairedDifferenceData.Rd cg/man/show.cgPairedDifferenceDescriptiveTable.Rd cg/man/globalTest.cgOneFactorFit.Rd cg/man/samplesizeGraph.cgOneFactorSampleSizeTable.Rd cg/man/print.cgOneFactorDescriptiveTable.Rd cg/man/errorbargraph.Rd cg/man/show.cgPairedDifferenceVarianceTable.Rd cg/man/varianceTable.cgPairedDifferenceFit.Rd cg/man/comparisons.Rd cg/man/summary.cgPairedDifferenceFit.Rd cg/man/cg-package.Rd cg/man/gmcsfcens.Rd cg/man/print.cgOneFactorDownweightedTable.Rd cg/man/boxplot.cgOneFactorData.Rd cg/man/downweightedTable.cgOneFactorFit.Rd cg/man/correlationTable.Rd cg/man/samplesizeTable.Rd cg/man/descriptiveTable.cgPairedDifferenceData.Rd cg/man/pointGraph.Rd cg/man/show.cgOneFactorDescriptiveTable.Rd cg/man/print.cgPairedDifferenceFit.Rd cg/man/samplesizeTable.cgPairedDifferenceFit.Rd cg/man/show.cgPairedDifferenceSampleSizeTable.Rd cg/man/show.cgOneFactorGlobalTest.Rd cg/man/comparisonsGraph.cgOneFactorComparisonsTable.Rd cg/man/varianceTable.Rd cg/man/descriptiveTable.cgOneFactorData.Rd cg/man/show.cgOneFactorSampleSizeTable.Rd cg/man/pointGraph.cgOneFactorData.Rd cg/man/qqGraph.cgOneFactorFit.Rd cg/man/showObj.Rd cg/man/print.cgOneFactorComparisonsTable.Rd cg/man/show.cgPairedDifferenceComparisonsTable.Rd cg/man/comparisonsGraph.cgPairedDifferenceComparisonsTable.Rd cg/man/comparisonsTable.cgPairedDifferenceFit.Rd cg/man/diffGraph.cgPairedDifferenceData.Rd cg/man/samplesizeGraph.Rd cg/man/kmGraph.cgOneFactorData.Rd cg/man/cgInternalClasses.Rd cg/man/errorBarGraph.cgOneFactorFit.Rd cg/man/show.cgOneFactorComparisonsTable.Rd cg/man/print.cgOneFactorSampleSizeTable.Rd cg/man/print.cgPairedDifferenceSampleSizeTable.Rd cg/man/print.cgPairedDifferenceCorrelationTable.Rd cg/man/show.cgPairedDifferenceCorrelationTable.Rd cg/man/cgLineColors.Rd cg/man/prepare.Rd cg/man/comparisonsTable.Rd cg/man/print.cgOneFactorGrpSummaryTable.Rd cg/man/varianceGraph.cgOneFactorFit.Rd cg/man/show.cgOneFactorDownweightedTable.Rd cg/man/downweightedTable.cgPairedDifferenceFit.Rd cg/man/print.cgOneFactorGlobalTest.Rd cg/man/show.cgPairedDifferenceDownweightedTable.Rd cg/man/summary.cgOneFactorFit.Rd cg/man/canine.Rd cg/man/fit.cgPairedDifferenceData.Rd cg/man/profileGraph.Rd cg/man/profileGraph.cgPairedDifferenceData.Rd cg/man/canine.listfmt.Rd cg/man/fit.cgOneFactorData.Rd cg/man/globalTest.Rd cg/man/print.cgOneFactorFit.Rd cg/man/samplesizeGraph.cgPairedDifferenceSampleSizeTable.Rd cg/man/print.cgPairedDifferenceDescriptiveTable.Rd cg/man/comparisonsTable.cgOneFactorFit.Rd cg/man/varianceGraph.Rd cg/man/grpSummaryTable.Rd cg/man/showObj.cgPairedDifferenceFit.Rd cg/man/qqGraph.cgPairedDifferenceFit.Rd cg/man/comparisonsgraph.Rd cg/man/prepareCGOneFactorData.Rd cg/man/show.cgOneFactorGrpSummaryTable.Rd cg/man/comparisonsGraphGeneric.Rd cg/man/print.cgPairedDifferenceVarianceTable.Rd cg/man/errorBarGraphGeneric.Rd cg/man/descriptiveTable.Rd cg/man/kmGraph.Rd cg/man/qqGraph.Rd cg/man/grpSummaryTable.cgOneFactorFit.Rd cg/man/anorexiaFT.Rd cg/man/showObj.cgOneFactorFit.Rd cg/man/samplesizeTable.cgOneFactorFit.Rd cg/man/downweightedTable.Rd cg/man/gmcsfcens.listfmt.Rd

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