chemometrics: Multivariate Statistical Analysis in Chemometrics
Version 1.4.2

R companion to the book "Introduction to Multivariate Statistical Analysis in Chemometrics" written by K. Varmuza and P. Filzmoser (2009).

Browse man pages Browse package API and functions Browse package files

AuthorPeter Filzmoser and Kurt Varmuza
Date of publication2017-03-17 09:17:12 UTC
MaintainerP. Filzmoser <P.Filzmoser@tuwien.ac.at>
LicenseGPL (>= 3)
Version1.4.2
URL http://www.statistik.tuwien.ac.at/public/filz/
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("chemometrics")

Man pages

alr: additive logratio transformation
ash: ash data
cereal: Data from cereals
chemometrics: This package is the R companion to the book "Introduction to...
clr: centered logratio transformation
clvalidity: compute and plot cluster validity
delintercept: Delete intercept from model matrix
drawMahal: Draws ellipses according to Mahalanobis distances
glass: glass vessels data
glass.grp: glass types of the glass data
hyptis: Hyptis data set
ilr: isometric logratio transformation
knnEval: kNN evaluation by CV
lassocoef: Plot Lasso coefficients
lassoCV: CV for Lasso regression
lmCV: Repeated Cross Validation for lm
Moutlier: Plots classical and robust Mahalanobis distances
mvr_dcv: Repeated double-cross-validation for PLS and PCR
nipals: PCA calculation with the NIPALS algorithm
NIR: NIR data
nnetEval: Neural network evaluation by CV
PAC: GC retention indices
pcaCV: Determine the number of PCA components with repeated cross...
pcaDiagplot: Diagnostics plot for PCA
pcaVarexpl: PCA diagnostics for variables
Phenyl: Phenyl data set
plotcompmvr: Component plot for repeated DCV
plotcompprm: Component plot for repeated DCV of PRM
plotpredmvr: Plot predictions from repeated DCV
plotpredprm: Plot predictions from repeated DCV of PRM
plotprm: Plot results from robust PLS
plotresmvr: Plot residuals from repeated DCV
plotresprm: Plot residuals from repeated DCV of PRM
plotRidge: Plot results of Ridge regression
plotSEPmvr: Plot SEP from repeated DCV
plotSEPprm: Plot trimmed SEP from repeated DCV of PRM
plotsom: Plot SOM results
pls1_nipals: PLS1 by NIPALS
pls2_nipals: PLS2 by NIPALS
pls_eigen: Eigenvector algorithm for PLS
prm: Robust PLS
prm_cv: Cross-validation for robust PLS
prm_dcv: Repeated double-cross-validation for robust PLS
ridgeCV: Repeated CV for Ridge regression
RPvectors: Generating random projection directions
sd_trim: Trimmed standard deviation
stepwise: Stepwise regression
svmEval: Support Vector Machine evaluation by CV
treeEval: Classification tree evaluation by CV

Functions

Moutlier Man page
NIR Man page
PAC Man page
Phenyl Man page
RPvectors Man page Source code
alr Man page
ash Man page
cereal Man page
chemometrics Man page
chemometrics-package Man page
clr Man page
clvalidity Man page Source code
delintercept Man page Source code
drawMahal Man page
glass Man page
glass.grp Man page
hyptis Man page
ilr Man page
knnEval Man page Source code
lassoCV Man page Source code
lassocoef Man page Source code
lmCV Man page Source code
mvr_dcv Man page Source code
nipals Man page
nnetEval Man page Source code
pcaCV Man page Source code
pcaDiagplot Man page
pcaVarexpl Man page
plotRidge Man page Source code
plotSEPmvr Man page Source code
plotSEPprm Man page Source code
plotcompmvr Man page Source code
plotcompprm Man page Source code
plotpredmvr Man page Source code
plotpredprm Man page Source code
plotprm Man page Source code
plotresmvr Man page Source code
plotresprm Man page Source code
plotsom Man page Source code
pls1_nipals Man page Source code
pls2_nipals Man page Source code
pls_eigen Man page Source code
prm Man page Source code
prm_cv Man page Source code
prm_dcv Man page Source code
ridgeCV Man page Source code
sd_trim Man page Source code
stepwise Man page Source code
svmEval Man page Source code
treeEval Man page Source code

Files

inst
inst/doc
inst/doc/chemometrics-vignette.rnw
inst/doc/chemometrics-vignette.R
inst/doc/chemometrics-vignette.pdf
NAMESPACE
data
data/hyptis.rda
data/PAC.rda
data/cereal.rda
data/glass.grp.rda
data/Phenyl.rda
data/datalist
data/NIR.rda
data/glass.rda
data/ash.rda
R
R/sd_trim.R
R/pls_eigen.R
R/drawMahal.R
R/lmCV.R
R/plotSEPprm.R
R/RPvectors.R
R/nnetEval.R
R/Moutlier.R
R/pls1_nipals.R
R/pcaVarexpl.R
R/plotcompmvr.R
R/prm_dcv.R
R/plotSEPmvr.R
R/pls2_nipals.R
R/nipals.R
R/plotpredprm.R
R/treeEval.R
R/prm_cv.R
R/svmEval.R
R/clvalidity.R
R/plotRidge.R
R/plotpredmvr.R
R/knnEval.R
R/lassocoef.R
R/clr.R
R/prm.R
R/plotsom.R
R/plotresmvr.R
R/lassoCV.R
R/mvr_dcv.R
R/pcaCV.R
R/plotcompprm.R
R/plotprm.R
R/stepwise.R
R/alr.R
R/pcaDiagplot.R
R/ilr.R
R/delintercept.R
R/ridgeCV.R
R/plotresprm.R
vignettes
vignettes/chemometrics-vignette.rnw
vignettes/Figures
vignettes/Figures/Fig-03-04-seppcr.pdf
vignettes/Figures/Fig-03-03-comppcr.pdf
vignettes/Figures/Fig-04-09-classcomp.pdf
vignettes/Figures/Fig-04-04-prunetree.pdf
vignettes/Figures/Fig-04-08c-resprmdcv.pdf
vignettes/Figures/Fig-02-03-pcaDiagplot-nipals.pdf
vignettes/Figures/Fig-04-02-repknn.pdf
vignettes/Figures/Fig-03-14-ridgecv.pdf
vignettes/Figures/Fig-03-01-BIC.pdf
vignettes/Figures/Fig-03-13-plotridge.pdf
vignettes/Figures/Fig-02-01-pcaCV.pdf
vignettes/Figures/Fig-03-02-lmCV.pdf
vignettes/Figures/Fig-03-05-predpcr.pdf
vignettes/Figures/Fig-03-15-lassocv.pdf
vignettes/Figures/Fig-04-03-treeeval.pdf
vignettes/Figures/Fig-03-07-comppls.pdf
vignettes/Figures/Fig-04-08b-predprmdcv.pdf
vignettes/Figures/Fig-04-11a-prmdcv.pdf
vignettes/Figures/Fig-03-06-respcr.pdf
vignettes/Figures/Fig-04-08-svmeval.pdf
vignettes/Figures/Fig-04-07-svmexpl.pdf
vignettes/Figures/Fig-03-11-prmcv.pdf
vignettes/Figures/Fig-03-12-plotprm.pdf
vignettes/Figures/Fig-04-01-knneval.pdf
vignettes/Figures/Fig-04-07a-compprmdcv.pdf
vignettes/Figures/Fig-04-08a-sepprmdcv.pdf
vignettes/Figures/Fig-B-01-logratio.pdf
vignettes/Figures/Fig-03-09-predpls.pdf
vignettes/Figures/Fig-03-08-seppls.pdf
vignettes/Figures/compress
vignettes/Figures/Fig-02-04-pcaDiagplot-robust.pdf
vignettes/Figures/Fig-04-06-nneteval.pdf
vignettes/Figures/Fig-02-02-outliers.pdf
vignettes/Figures/Fig-04-05-nnetfreq.pdf
vignettes/Figures/Fig-03-10-respls.pdf
vignettes/Figures/Fig-03-16-lassocoef.PNG
vignettes/bibliography.bib
vignettes/shadethm.sty
vignettes/zi4.sty
vignettes/nicefrac.sty
MD5
build
build/vignette.rds
DESCRIPTION
man
man/stepwise.Rd
man/PAC.Rd
man/plotRidge.Rd
man/pls1_nipals.Rd
man/clvalidity.Rd
man/pls2_nipals.Rd
man/pcaVarexpl.Rd
man/plotresmvr.Rd
man/pcaDiagplot.Rd
man/ridgeCV.Rd
man/prm.Rd
man/delintercept.Rd
man/plotcompmvr.Rd
man/treeEval.Rd
man/alr.Rd
man/lassocoef.Rd
man/plotprm.Rd
man/clr.Rd
man/RPvectors.Rd
man/mvr_dcv.Rd
man/prm_cv.Rd
man/ilr.Rd
man/plotSEPprm.Rd
man/plotcompprm.Rd
man/ash.Rd
man/Phenyl.Rd
man/glass.grp.Rd
man/plotsom.Rd
man/NIR.Rd
man/drawMahal.Rd
man/cereal.Rd
man/Moutlier.Rd
man/nnetEval.Rd
man/knnEval.Rd
man/nipals.Rd
man/plotresprm.Rd
man/svmEval.Rd
man/prm_dcv.Rd
man/pcaCV.Rd
man/plotpredprm.Rd
man/sd_trim.Rd
man/plotpredmvr.Rd
man/hyptis.Rd
man/pls_eigen.Rd
man/lmCV.Rd
man/lassoCV.Rd
man/glass.Rd
man/chemometrics.Rd
man/plotSEPmvr.Rd
chemometrics documentation built on May 29, 2017, 10:42 a.m.