chemometrics: Multivariate Statistical Analysis in Chemometrics

R companion to the book "Introduction to Multivariate Statistical Analysis in Chemometrics" written by K. Varmuza and P. Filzmoser (2009).

AuthorPeter Filzmoser and Kurt Varmuza
Date of publication2016-08-03 11:13:56
MaintainerP. Filzmoser <P.Filzmoser@tuwien.ac.at>
LicenseGPL (>= 3)
Version1.4.1
http://www.statistik.tuwien.ac.at/public/filz/

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Man pages

alr: additive logratio transformation

ash: ash data

cereal: Data from cereals

chemometrics: This package is the R companion to the book "Introduction to...

clr: centered logratio transformation

clvalidity: compute and plot cluster validity

delintercept: Delete intercept from model matrix

drawMahal: Draws ellipses according to Mahalanobis distances

glass: glass vessels data

glass.grp: glass types of the glass data

hyptis: Hyptis data set

ilr: isometric logratio transformation

knnEval: kNN evaluation by CV

lassocoef: Plot Lasso coefficients

lassoCV: CV for Lasso regression

lmCV: Repeated Cross Validation for lm

Moutlier: Plots classical and robust Mahalanobis distances

mvr_dcv: Repeated double-cross-validation for PLS and PCR

nipals: PCA calculation with the NIPALS algorithm

NIR: NIR data

nnetEval: Neural network evaluation by CV

PAC: GC retention indices

pcaCV: Determine the number of PCA components with repeated cross...

pcaDiagplot: Diagnostics plot for PCA

pcaVarexpl: PCA diagnostics for variables

Phenyl: Phenyl data set

plotcompmvr: Component plot for repeated DCV

plotcompprm: Component plot for repeated DCV of PRM

plotpredmvr: Plot predictions from repeated DCV

plotpredprm: Plot predictions from repeated DCV of PRM

plotprm: Plot results from robust PLS

plotresmvr: Plot residuals from repeated DCV

plotresprm: Plot residuals from repeated DCV of PRM

plotRidge: Plot results of Ridge regression

plotSEPmvr: Plot SEP from repeated DCV

plotSEPprm: Plot trimmed SEP from repeated DCV of PRM

plotsom: Plot SOM results

pls1_nipals: PLS1 by NIPALS

pls2_nipals: PLS2 by NIPALS

pls_eigen: Eigenvector algorithm for PLS

prm: Robust PLS

prm_cv: Cross-validation for robust PLS

prm_dcv: Repeated double-cross-validation for robust PLS

ridgeCV: Repeated CV for Ridge regression

RPvectors: Generating random projection directions

sd_trim: Trimmed standard deviation

stepwise: Stepwise regression

svmEval: Support Vector Machine evaluation by CV

treeEval: Classification tree evaluation by CV

Files in this package

chemometrics
chemometrics/inst
chemometrics/inst/doc
chemometrics/inst/doc/chemometrics-vignette.rnw
chemometrics/inst/doc/chemometrics-vignette.R
chemometrics/inst/doc/chemometrics-vignette.pdf
chemometrics/NAMESPACE
chemometrics/data
chemometrics/data/hyptis.rda
chemometrics/data/PAC.rda
chemometrics/data/cereal.rda
chemometrics/data/glass.grp.rda
chemometrics/data/Phenyl.rda
chemometrics/data/datalist
chemometrics/data/NIR.rda
chemometrics/data/glass.rda
chemometrics/data/ash.rda
chemometrics/R
chemometrics/R/sd_trim.R chemometrics/R/pls_eigen.R chemometrics/R/drawMahal.R chemometrics/R/lmCV.R chemometrics/R/plotSEPprm.R chemometrics/R/RPvectors.R chemometrics/R/nnetEval.R chemometrics/R/Moutlier.R chemometrics/R/pls1_nipals.R chemometrics/R/pcaVarexpl.R chemometrics/R/plotcompmvr.R chemometrics/R/prm_dcv.R chemometrics/R/plotSEPmvr.R chemometrics/R/pls2_nipals.R chemometrics/R/nipals.R chemometrics/R/plotpredprm.R chemometrics/R/treeEval.R chemometrics/R/prm_cv.R chemometrics/R/svmEval.R chemometrics/R/clvalidity.R chemometrics/R/plotRidge.R chemometrics/R/plotpredmvr.R chemometrics/R/knnEval.R chemometrics/R/lassocoef.R chemometrics/R/clr.R chemometrics/R/prm.R chemometrics/R/plotsom.R chemometrics/R/plotresmvr.R chemometrics/R/lassoCV.R chemometrics/R/mvr_dcv.R chemometrics/R/pcaCV.R chemometrics/R/plotcompprm.R chemometrics/R/plotprm.R chemometrics/R/stepwise.R chemometrics/R/alr.R chemometrics/R/pcaDiagplot.R chemometrics/R/ilr.R chemometrics/R/delintercept.R chemometrics/R/ridgeCV.R chemometrics/R/plotresprm.R
chemometrics/vignettes
chemometrics/vignettes/chemometrics-vignette.rnw
chemometrics/vignettes/Figures
chemometrics/vignettes/Figures/Fig-03-04-seppcr.pdf
chemometrics/vignettes/Figures/Fig-03-03-comppcr.pdf
chemometrics/vignettes/Figures/Fig-04-09-classcomp.pdf
chemometrics/vignettes/Figures/Fig-04-04-prunetree.pdf
chemometrics/vignettes/Figures/Fig-04-08c-resprmdcv.pdf
chemometrics/vignettes/Figures/Fig-02-03-pcaDiagplot-nipals.pdf
chemometrics/vignettes/Figures/Fig-04-02-repknn.pdf
chemometrics/vignettes/Figures/Fig-03-14-ridgecv.pdf
chemometrics/vignettes/Figures/Fig-03-01-BIC.pdf
chemometrics/vignettes/Figures/Fig-03-13-plotridge.pdf
chemometrics/vignettes/Figures/Fig-02-01-pcaCV.pdf
chemometrics/vignettes/Figures/Fig-03-02-lmCV.pdf
chemometrics/vignettes/Figures/Fig-03-05-predpcr.pdf
chemometrics/vignettes/Figures/Fig-03-15-lassocv.pdf
chemometrics/vignettes/Figures/Fig-04-03-treeeval.pdf
chemometrics/vignettes/Figures/Fig-03-07-comppls.pdf
chemometrics/vignettes/Figures/Fig-04-08b-predprmdcv.pdf
chemometrics/vignettes/Figures/Fig-04-11a-prmdcv.pdf
chemometrics/vignettes/Figures/Fig-03-06-respcr.pdf
chemometrics/vignettes/Figures/Fig-04-08-svmeval.pdf
chemometrics/vignettes/Figures/Fig-04-07-svmexpl.pdf
chemometrics/vignettes/Figures/Fig-03-11-prmcv.pdf
chemometrics/vignettes/Figures/Fig-03-12-plotprm.pdf
chemometrics/vignettes/Figures/Fig-04-01-knneval.pdf
chemometrics/vignettes/Figures/Fig-04-07a-compprmdcv.pdf
chemometrics/vignettes/Figures/Fig-04-08a-sepprmdcv.pdf
chemometrics/vignettes/Figures/Fig-B-01-logratio.pdf
chemometrics/vignettes/Figures/Fig-03-09-predpls.pdf
chemometrics/vignettes/Figures/Fig-03-08-seppls.pdf
chemometrics/vignettes/Figures/compress
chemometrics/vignettes/Figures/Fig-02-04-pcaDiagplot-robust.pdf
chemometrics/vignettes/Figures/Fig-04-06-nneteval.pdf
chemometrics/vignettes/Figures/Fig-02-02-outliers.pdf
chemometrics/vignettes/Figures/Fig-04-05-nnetfreq.pdf
chemometrics/vignettes/Figures/Fig-03-10-respls.pdf
chemometrics/vignettes/Figures/Fig-03-16-lassocoef.PNG
chemometrics/vignettes/bibliography.bib
chemometrics/vignettes/shadethm.sty
chemometrics/vignettes/zi4.sty
chemometrics/vignettes/nicefrac.sty
chemometrics/MD5
chemometrics/build
chemometrics/build/vignette.rds
chemometrics/DESCRIPTION
chemometrics/man
chemometrics/man/stepwise.Rd chemometrics/man/PAC.Rd chemometrics/man/plotRidge.Rd chemometrics/man/pls1_nipals.Rd chemometrics/man/clvalidity.Rd chemometrics/man/pls2_nipals.Rd chemometrics/man/pcaVarexpl.Rd chemometrics/man/plotresmvr.Rd chemometrics/man/pcaDiagplot.Rd chemometrics/man/ridgeCV.Rd chemometrics/man/prm.Rd chemometrics/man/delintercept.Rd chemometrics/man/plotcompmvr.Rd chemometrics/man/treeEval.Rd chemometrics/man/alr.Rd chemometrics/man/lassocoef.Rd chemometrics/man/plotprm.Rd chemometrics/man/clr.Rd chemometrics/man/RPvectors.Rd chemometrics/man/mvr_dcv.Rd chemometrics/man/prm_cv.Rd chemometrics/man/ilr.Rd chemometrics/man/plotSEPprm.Rd chemometrics/man/plotcompprm.Rd chemometrics/man/ash.Rd chemometrics/man/Phenyl.Rd chemometrics/man/glass.grp.Rd chemometrics/man/plotsom.Rd chemometrics/man/NIR.Rd chemometrics/man/drawMahal.Rd chemometrics/man/cereal.Rd chemometrics/man/Moutlier.Rd chemometrics/man/nnetEval.Rd chemometrics/man/knnEval.Rd chemometrics/man/nipals.Rd chemometrics/man/plotresprm.Rd chemometrics/man/svmEval.Rd chemometrics/man/prm_dcv.Rd chemometrics/man/pcaCV.Rd chemometrics/man/plotpredprm.Rd chemometrics/man/sd_trim.Rd chemometrics/man/plotpredmvr.Rd chemometrics/man/hyptis.Rd chemometrics/man/pls_eigen.Rd chemometrics/man/lmCV.Rd chemometrics/man/lassoCV.Rd chemometrics/man/glass.Rd chemometrics/man/chemometrics.Rd chemometrics/man/plotSEPmvr.Rd

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