print.sota: Print Function for a SOTA Object
In clValid: Validation of Clustering Results

Description Usage Arguments Value Author(s) References See Also Examples

A default print method for a SOTA object.

1 2	## S3 method for class 'sota' print(x, ...)

`x`	a SOTA object as returned by the `sota` function
`...`	Additional arguments to pass to `print`

The print function does not return anything. It simply displays in the console window general information about the paritioning (cluster ID, Size, and Diversity Score), as well as cluster centroids (average profiles within each cluster) and the distance that has been used.

Vasyl Pihur, Guy Brock, Susmita Datta, Somnath Datta

Herrero, J., Valencia, A, and Dopazo, J. (2005). A hierarchical unsupervised growing neural network for clustering gene expression patterns. Bioinformatics, 17, 126-136.

sota, print.sota

data(mouse)
express <- mouse[,c("M1","M2","M3","NC1","NC2","NC3")]
rownames(express) <- mouse$ID

sotaCl <- sota(as.matrix(express), 4)
names(sotaCl)
sotaCl
plot(sotaCl)
plot(sotaCl, cl=2)